Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 1e-12 >seq4 Length=195412 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/230 (70%), Gaps = 13/230 (6%) Strand=Plus/Plus Query 101843 TTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT--GCAAAGCAATAACG 101900 ||||| |||||||||||||| | | |||||| | ||||| || | ||| |||| Sbjct 71155 TTCCCTTGCATCAAGAAGAAGGCGGACTGGGCTCTGCGCTGGATCGGCGA--CAAGAACG 71212 Query 101901 ----ATTTGGCGGAACTAA--TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTG 101954 |||||| |||| || | || || || || ||||||||||||||||| || Sbjct 71213 CTTCATTTGG---AACTCGCGTTATCGCGTTCGCCGCCGTTGAAGGAATCTTCTTCTCTG 71269 Query 101955 GTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCT 102014 | | ||||| |||| || ||| ||||||| | || | ||||||| ||||| | Sbjct 71270 GGTCGTTCGCTGCCATCTTTTGGCTCAAGAAGCGAGGCCTCATGCCTGGACTCACTCACA 71329 Query 102015 CCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGC 102064 ||| || | ||||| | || ||||| ||||| || |||||||| ||| Sbjct 71330 GCAACGAACTGATTTCCCGCGATGAAGGCCTTCACCGTGACTTTGCCTGC 71379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989547687215120