Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq2599 122 2e-23 >seq2599 Length=15424 Score = 122 bits (134), Expect = 2e-23 Identities = 180/253 (71%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 12704 AAAACATTGCCAGATAATTCTGTTGACCTTATTGCCACTGACCCACCTTACTTTCGAGTA 12763 ||||| |||| ||||| | | ||||||| || |||||||||||||| || || || || Sbjct 12634 AAAACCCTGCCGGATAACTGTATTGACCTGATAGCCACTGACCCACCGTATTTCCGGGTT 12693 Query 12764 AAGCAAGATGCCKGGGATAACCAGTGGGATGATGAGACAGAGTTCCTGGCGTGGCTTGAC 12823 || || || | |||| | |||||||| |||| || | | ||| |||||||| ||| Sbjct 12694 AAAGAATGTGGCTGGGACAGGCAGTGGGAGGATGTCACGGCTTACCTTGCGTGGCTGGAC 12753 Query 12824 GATATTCTCTTTGACTTATGGCGAATATTGAAGCCATCGGGCAGTTTGTATCTATTTTGT 12883 || || || ||| || ||||| || |||| || ||||| ||||| | || ||| Sbjct 12754 GAGATGCTGACTGAGTTCTGGCGGGTACTGAAACCCAACGGCAGCCTGTATATGTTCTGT 12813 Query 12884 TCTGACCGGTTAGCGGCCAGA-ACTGAGGTGCTAATTGCTGAACGCTTTAATGTCTTGAA 12942 | ||| | || |||| |||||| |||| | |||||| |||||||| || || Sbjct 12814 GGTTCCCGTCTGGC-CTCAGATACTGAGCTGCTCGTGCGTGAACGTTTTAATGTGTTAAA 12872 Query 12943 CCATATCGTCTGG 12955 |||||| ||||| Sbjct 12873 CCATATTATCTGG 12885 Lambda K H 0.636 0.409 0.915 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138107302810880