Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq2595 554 9e-154 seq2606 441 1e-119 seq2573 105 1e-18 seq2689 102 2e-17 >seq2595 Length=21780 Score = 554 bits (614), Expect = 9e-154 Identities = 958/1380 (69%), Gaps = 20/1380 (1%) Strand=Plus/Plus Query 10401 ATCCCTGTGAGTTGAAACCATGCCGATTATCGACCTGAACCAGCTACCCGCACCGGATGT 10460 || || ||||| | || | ||||| | ||||| | | |||| |||| |||||||||| Sbjct 19027 ATTCCGGTGAGGT-AAGCAATGCCAACAATCGATTTAAGCCAGTTACCACCACCGGATGT 19085 Query 10461 GGTCGAGGAGCTGGACTTTGAAACCATTCTCGCCGAACGCAAGGCGACA-CTGATTTCCC 10519 ||| ||| ||||| | ||| | | | || || || ||| |||||||| | Sbjct 19086 GGTTGAGCCACTGGATTACGAACAACTGTTAGAAGAGCGTAAA-CGAGGTCTGATTTCGC 19144 Query 10520 TTTACCCGGAAGACCAGCAGGAGGCGGTCGCCCGTACCCTGACGCTGGAATCTGAGCCTC 10579 |||| |||| ||| |||||||| || || ||||| || || |||||||| || ||| Sbjct 19145 TTTATCCGGCAGATCAGCAGGATGCTGTTGCCCGAACATTGCAACTGGAATCAGAACCTT 19204 Query 10580 TCGTCAAACTGCTGGAGGAAAATGCTTATCGTGA---GCTTATCTGGCGTCAGCGTGTGA 10636 | || || ||||||| ||||||| || || || |||| | ||| ||||| || | Sbjct 19205 TGGTGAAGTTGCTGGAAGAAAATGTGTACCGCGAATTGCTTCT---GCGCCAGCGCGTTA 19261 Query 10637 ATGAGGCTGCACGGGCGGTGATGCTGGCCTGTGCAGCCGGTAATGACCTTGATGTGATTG 10696 |||| || || || ||||| ||| |||||| | || |||||| ||| || ||| | | | Sbjct 19262 ATGAAGCAGCCCGTGCGGTTATGGTGGCCTATTCAACCGGTAGTGATCTGGATCAGCTGG 19321 Query 10697 GTGCCAATTACAACACCACGCGCCTGATTATCACCCCGGCAGATGATTCGACCATCCCGC 10756 | | ||| ||||| ||||| || || | | || ||| |||||||| | |||| Sbjct 19322 GCTCGAATAACAACGTATCGCGCATGGTTTTGCGTTCTGCGGATAATTCGACCGTACCGC 19381 Query 10757 CGACACCGGCAGTGATGGAATCTGACACCGATTATCGTCTGCGTATTCAGCAGGCGTTTG 10816 | || || || || |||||||| |||| ||||| |||| | ||||||| ||||| |||| Sbjct 19382 CAACTCCTGCCGTTATGGAATCCGACAACGATTTTCGTGTCCGTATTCCACAGGCATTTG 19441 Query 10817 AAGGTTTAAGCGTCGCCGGGTCGGTGGGTGCCTATCAGTATCATGGCCGCAGTGCCGACG 10876 ||||||| ||||| || || |||||||||| ||| | ||||||| ||| ||||| || | Sbjct 19442 AAGGTTTGAGCGTTGCAGGCCCGGTGGGTGCTTATGAATATCATGCCCGTAGTGCGGATG 19501 Query 10877 GGCGTGTCGCGGATATCTCTGTCACCAGTCCGTCTCCGGCCTGCGTCACCATCTCTGTGC 10936 | || || || ||| || | | ||| ||||| ||||| |||||| | || | Sbjct 19502 GCCGCGTTGCAGATGCATCGGCAATCAGCCCGTCACCGGCTAACGTCACAGTAACTATTA 19561 Query 10937 TGTCACGTGAGAATAACGGTGTGGCATCCGAAGACCTGCTGGCTGTGGTACGTAACGCCC 10996 |||| |||| | || || ||||||||| |||| ||||||| | || || |||| Sbjct 19562 TGTCCCGTGCAGACAAAGGAGTGGCATCCAAAGAGCTGCTGGAAATTGTCGAAAAAGCCC 19621 Query 10997 TTAATGGCGAGGATGTCAGGCCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCG 11056 | |||| ||| | || | |||||||| || || ||| || ||||| || ||| | Sbjct 19622 TGAATGACGAAAACGTGCGTCCGGTGGCTGATCGTCTGAAAGTCCAGTCAGCGAGCATTG 19681 Query 11057 TTGAATACCAGATAAACGCCACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCC 11116 | ||||| | || | || ||| ||| | | ||| || ||| ||| || |||| Sbjct 19682 TGGAATATGAAATTGATGCGGTGCTGTACATCTTCCCGACGCCGGAATCCGAGCCTATCC 19741 Query 11117 GCGCGGCCGCAGTaaaaaaaCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCG 11176 || ||| |||| | |||||| || ||| | || ||||| || |||| || | Sbjct 19742 GCAAGGCAGCAGAGCAGAAACTGAAACACTATGTTGAAGCGCAGCATCGTTTGGGACGTG 19801 Query 11177 ACATCCGTCTGTCTGCCATTTATGCCGCTTTGCATGTGGAAGGCGTGCAGCGTGTCGAAC 11236 | || ||| |||| || ||||| ||||| ||||||||||||| || |||||||| || | Sbjct 19802 ATATTCGTTTGTCAGCTATTTACGCCGCACTGCATGTGGAAGGTGTCCAGCGTGTGGAGC 19861 Query 11237 TGACTGCACCACTGGCTGACATCGTGCTCAACAGTACGCAGGCGTCTTTCTGTACCGAAT 11296 ||| |||||| || ||| | || | | | || ||||| |||| || ||| || Sbjct 19862 TGAAAGCACCATTGAAAGACGTTGTATTGGATAAAACACAGGCTTCTTATTGCACC-AAA 19920 Query 11297 ACCGCGTCGTGAC---CGGAGGCTCGGATGAGTGATTCGCGACTGCTGCCGACCGGCTCA 11353 ||| | |||| ||||| || ||||| |||| || || ||||||| || ||| Sbjct 19921 ACCAC--ACTGACAATGGGAGGTTCTGATGAATGAT---CGCCTTCTGCCGATGGGTTCA 19975 Query 11354 TCACCGCTTGAAGTTGCTGCCGCAAAAGCCTGTGCGGAAATTGAAAAAACGCCGGTCAGT 11413 | ||| | ||| | ||||| || ||||||||||| || | | || | || Sbjct 19976 ACGCCGTTAGAACTGGCTGCGGCGAAAGCCTGTGCCGAGTTGCAGAAGATCAAAATCCCA 20035 Query 11414 ATTCGTGAGCTGTGGAACCCGGATACCTGTCCGGCAAATCTGCTGCCGTGGCTGGCGTGG 11473 | || ||||||||||| ||||| |||||||||||| | ||||| | ||||| ||| Sbjct 20036 TTGCGGGAGCTGTGGAATCCGGACACCTGTCCGGCATCGTTACTGCCTTATCTGGCATGG 20095 Query 11474 GCGTTTTCGGTCGACAGGTGGGATGAAAAGTGGCCGGA-AGCGACAAAACGCGCCGTTAT 11532 |||| || || ||| | ||||| ||||| ||| | || ||| || ||| | | || || Sbjct 20096 GCGTGGTCTGTGGACCGCTGGGACGAAAACTGGTCTGAGAGC-ACCAAAAGGGAAGTGAT 20154 Query 11533 CCGCGATGCGTATTTCATTCATTGTCATAAAGGCACTGTCGGCGCAATCCGGCGTGTGGT 11592 | | | | ||| | ||| || ||||| || | || || ||||| || ||| | Sbjct 20155 CAAGGGTTCACTGTTCCTGCATAAACACAAAGGAACGATTGGAGCCATCCGACGAGTGAT 20214 Query 11593 GGAGCCGCTCGGCTATCTCATTAACGTAAAGGAATGGTGGGAGACAAACGACCCGCCCGG 11652 |||||| | || |||||||| |||||||||||||||| |||| ||||| | || || Sbjct 20215 TGAGCCGTTGGGTTATCTCATCCGCGTAAAGGAATGGTGGCAGACCAACGATGCCCCAGG 20274 Query 11653 AACCTTTCGCCTTGATATCGGTGTGCTGGAAAGCGGTATCACGGAGGAGATGTATCTGGA 11712 ||||| || || ||||| ||||| ||||| ||||||||||| | || |||| || Sbjct 20275 CACCTTCCGACTGGATATTGGTGTTCTGGACAGCGGTATCACCCATGAAATGTTCGAAGA 20334 Query 11713 AATGGAACGGCTGATTGCCGATGCCAAACCCGCAAGTCGCCATCTTATCGGTCTGAACAT 11772 | ||||| |||||| |||||| ||||| | ||| || ||| | || || || |||| Sbjct 20335 ACTGGAAAACCTGATTTTCGATGCAAAACCGGTAAGCCGACATTTGATTGGATTGGACAT 20394 >seq2606 Length=3143 Score = 441 bits (488), Expect = 1e-119 Identities = 1154/1740 (66%), Gaps = 74/1740 (4%) Strand=Plus/Plus Query 16472 GACTATCATCATGGCGTGCAGGTGCTGGAGATTAACGACGGCACCCGCGTCATTTCCACC 16531 || |||||||| || || | || | ||| |||||||| || || || ||| | ||| Sbjct 221 GATTATCATCACGGAGTCCGTGTACAGGAAATTAACGAAGGTACTCGTACCATCACTACC 280 Query 16532 GTATCCACTGCCATTGTCGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAACCTTC 16591 || ||| || || || || ||||| || || || || || || | |||| || Sbjct 281 GTTAGCACCGCTATCGTAGGTATGGTTTGTACTGCTCCTGACGCAGACGAAAAAACATTT 340 Query 16592 CCTCTCAATAAACCGGTGCTGATTACCAATGTGCAGAGCGCAATTGCAAAGGCCGGTAAA 16651 || | |||| || || |||||||| | || |||||| | || |||||||| || Sbjct 341 CCATTAAATACTCCAGTCCTGATTACTGACGTTATGAGCGCCAGTGGCAAGGCCGGGGAA 400 Query 16652 AAAGGCACGCTGGCGGCGTCGTTACAGGCCATCGCTGACCAGTCAAAACCGGTCACCGTT 16711 |||||||| || | | || | | |||||||||| ||| | || || || || Sbjct 401 AAAGGCACTTTGTCTACATCTCTGAAAGCCATCGCTGCTCAGGCTCTGCCTGTGACTGTG 460 Query 16712 GTTGTGCGCGTGGAAGACGGCACCGGCGACGACGAGGAAACGAAACTCGCGCAGACTGTT 16771 ||||| || |||||||| |||| | || ||| ||||| || || Sbjct 461 GTTGTTCGTGTGGAAGAAGGCA------AATCTGAAGAA--GAAAC-----CA-----TT 502 Query 16772 TCCAATATTATCGGCACC---ACCGACGAAAACGGTCAGTACACCGGACTGAAAGCCCTG 16828 || || ||||| ||||| ||| ||| || | ||||| || | || ||| Sbjct 503 AGTAACATCATCGGTGGTGTTACCGATGAA---GGTAAGAAAACCGGTATGCAGGCGCTG 559 Query 16829 ATGGGGGCTGA--GTCGGTTACCGGCGTTAAACCGCGCATTCTCGGCGTACCGGGACTGG 16886 ||| ||| | | | | | ||| |||||||| |||||||| || || || || |||| Sbjct 560 TTGGCGGCACAAAGCCAGCT--CGGTGTTAAACCACGCATTCTGGGTGTTCCAGGTCTGG 617 Query 16887 ACACCAAAGAGGTCGCCGTCGCACTGGCATCGGTATGCC--AGGAACTGAATGCCTTCGG 16944 || | ||| || || | | ||| || || ||| | || ||||||| || | | Sbjct 618 ACTCAAAACCAGTTGCTGCTGAACTCGC--CGCTATTGCTAAGCAACTGAAAGCAATGGC 675 Query 16945 GTATATCAGCGCATGGGGTTGTAAAACCATTTCCGAGGTGAAAGCCTACCGCCAGAATTT 17004 ||| ||||||| | || || |||| || || || || | || || | || || Sbjct 676 ATATGTCAGCGCTTATGGCTGCAAAAATATCTCTGAAGTTATCAAATATCGTGAAAACTT 735 Query 17005 CAGCCAGCGTGAGCTGATGGTTATCTGGCCGGATTTCCTCGCATGGGATAC-GGTTACCA 17063 | | ||||||||| | ||| | || ||||| |||||||| |||| | | ||| | | Sbjct 736 CGGTCAGCGTGAGGTAATGTTAATTTGGCCTGATTTCCTGAGATGGAACAAAGGTGA--A 793 Query 17064 GTACCACCGCCACCGCGTATGCCACCGCTCGTGCGCTGGGTCTGCGCGCTAAAATCGACC 17123 || | ||| ||| ||| || ||| ||| ||||| |||| || ||||||||| Sbjct 794 GTT--ATCGC-ACC-----TGCGACGGCTTATGCACTGGGCTTGCGTGCCAAAATCGACG 845 Query 17124 AGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTGAACGGTGTTACCGGCATCA 17183 | || |||||||| ||||| || ||||| || || || ||||| || || || | Sbjct 846 AAGAAACCGGCTGGCACAAAACCCTATCCAATGTGGGTGTTAACGGCGTAACGGGTCTAT 905 Query 17184 GTGCATCCGTCTTCTGGGATTTGCAGAAGCCAGGCACTGATGCTGACCTGCTGAACGAGG 17243 ||| |||||||||||| |||| | | || ||||| ||||| ||||||||| || Sbjct 906 CTGCTGATGTCTTCTGGGATCTGCAAGCGACTGGAACTGAGGCTGATCTGCTGAACCAGA 965 Query 17244 CAGGCGTCACAACGCTGGTTCGCCGCGACGGTTTTCGTTTCTGGGGTAACCGTACCTGC- 17302 | ||||||| ||| | ||| |||||||||||||||||||| || || ||| Sbjct 966 ATCACATCACAACACTGATCCGCAAAAACGGTTTTCGTTTCTGGGGTTCACGCACTTGCG 1025 Query 17303 -----------TCTGATGACCCGCTGTTCCTCTTTGAAAGCTACACACGCACCGCGCAGG 17351 ||||| ||| | ||||||| || ||||||||||| || ||||| |||| Sbjct 1026 CTGGCTCTGCTTCTGAGGACTCACTGTTCCCATTCGAAAGCTACACCCGTACCGCTCAGG 1085 Query 17352 TACTGGCCGACACGATGGCTGAGGCGCACATGTGGGCTATTGATAAGCCCATCACCGCAA 17411 ||||||| ||||| |||||||| ||||| |||||||| || || || || | ||| || Sbjct 1086 TACTGGCTGACACCATGGCTGACGCGCATATGTGGGCAATCGACAAACCGCTGACCCCAT 1145 Query 17412 CGCTGATTCGCGACATCATTGACGGCATCAATGCCAAATTCCGTGAACTGAAAAACAACG 17471 ||||| | |||||||| || || ||||||||||| || ||||||||||||||| || Sbjct 1146 CGCTGGTACGCGACATTATCGAAGGCATCAATGCTAAGTTCCGTGAACTGAAAGCGGGCG 1205 Query 17472 GTTATATCGTGGATGGCACATGCTGGTTCAGCGAAGAATCCAACGATGCGGAAACCCTCA 17531 | || ||| | || || ||||||| ||| || ||||||| || ||||| | Sbjct 1206 GCTACATCATTGACGGTCGTTGCTGGTATGACGACAAAATCAACGATAAAGACACCCTGA 1265 Query 17532 AGGCCGGAAAACTGTATATCGACTACGACTATACCCCGGTGCCTCCTCTCGAAAACCTGA 17591 | || || |||||| ||||| |||||||||||||| || || || || |||||| ||| Sbjct 1266 AAGCAGGCAAACTGACCATCGATTACGACTATACCCCTGTACCGCCACTGGAAAACATGA 1325 Query 17592 CCCTGCGCCAGCGTATTACTTCCAGATACCTGGCAAGTCTGGTCACTTCGGTTAACAGCA 17651 | |||||||| ||||| || |||||| | | | || | || || | Sbjct 1326 TGTTACGCCAGCGCATTACAGATAGTTACCTG--ATGGAT-TTCGCAAAAAGTATCAATA 1382 Query 17652 ATTAAGGAGCCTGACCGATGGCAATGCCGCGCAAACTCAAGTTAATGAACGTCTTTCTGA 17711 | ||||| | || || ||||||| | || |||||||| || | |||| | || Sbjct 1383 AATAAGG-GGCTAACTGATGGCATTACCTCGCAAACTTAAATATCTGAATTTGTTCAACG 1441 Query 17712 ACGGCTACAGCTATCAGGGCGTTG-CAAAGTCCGTCACGCTGCCAAAACTGACCCGTAAG 17770 | ||| ||| |||||||||| ||| | ||| | | || || || || |||| ||| || Sbjct 1442 ATGGCAACAACTATCAGGGCATTGTCGAAGAGC-TGACTCTTCCTAAGCTGAGCCGCAAA 1500 Query 17771 CTCGAAAACTATCGCGGTGCGGGGATGAACGGCAGCGCACCGGTAGACCTCGGCCTTGAT 17830 || ||| ||| || ||||| || ||||||||||||||| ||| || || || || ||| Sbjct 1501 CTGGAAGCCTACCGTGGTGCTGGTATGAACGGCAGCGCAATGGTGGATCTGGGTCTGGAT 1560 Query 17831 GATGATGCTCTGTCAATGGAGTGGTCGCTCGGTGG-ATT---CCCGGATTCGGTTATCTG 17886 || | || || ||| | | || || || ||| || | | | | | Sbjct 1561 GAAGGCGCATTGGATGCGGAATTCACTCTGGGCGGTATTGAGTCCCAACTGTACAAACAG 1620 Query 17887 -GGAGCTTTACGCTGCAACCAGTGCTGATGCCGTACCGATTCGTTTTGCTGGTTCTTACC 17945 || || | |||| ||| | |||| || | | || ||||| || |||| Sbjct 1621 TGGGGCAT--CGCT-----CAG-GTCGATGGTGTCATGCTGCGCTTTGCAGGCTCTTTTG 1672 Query 17946 AGCGCGACGATACCGGCGAAACGGTGGCCGTCGAAGTGGTCATGCGTGGGCGTCAGAAAG 18005 | ||||| || || || || ||| || || ||||| || |||||||| ||| | | Sbjct 1673 AACGCGAAGACACAGGTGATGTGGTTGCAGTTGAAGTTGTTATGCGTGGCCGTTTTCAGG 1732 Query 18006 AAGTCGATACCGGAGAGGGTAAACAGGGAGAGGATACCGAATCGAAACTCCCGGTGATTT 18065 || | ||| ||| ||| ||||| || | || || | ||| | | | || Sbjct 1733 AATTTGATCACGGTACTTATAAGCAGGGTGATAACACTCAAACCAAAATTACCGCGAAAA 1792 Query 18066 GTACTTATTTCAAGTTGACGATGGACGGTAAGGAGCTGGTCGAAATCGACACCATCAACA 18125 ||||| ||||| |||| ||| || | || ||| | |||||||||||| |||||| Sbjct 1793 ACACTTACTTCAAACTGACCTGGGATGGCGAAGAACTGATTGAAATCGACACCGTCAACA 1852 Query 18126 TGATTGAGAAGGTGAACGGCGTCGACCGGCTGGAGCAACACCGCCGCAATATCGGCCTGT 18185 || ||||||| ||| ||| | || || |||| || || || || ||| || |||| Sbjct 1853 TGGTTGAGAAAGTGGGCGGAGAAGATCGTCTGGCACAGCATCGTCGTGCTATTGGTCTGT 1912 >seq2573 Length=24683 Score = 105 bits (116), Expect = 1e-18 Identities = 194/282 (69%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 9559 ACTGACTGGCTTCAGTGGCTGACCCATCGTGCCGGTCGTTCGCGCACATGGTGGGCACCT 9618 || |||||||| | ||||||||| | || || || ||||| ||||||||||| Sbjct 1110 ACCGACTGGCTATACTGGCTGACCTCCAGAGCAGGAAACTCCCGCACTTGGTGGGCACCC 1051 Query 9619 TCCGTGGGGGAGCAGGTGCTGATTCTGGCCGTGGGCGGTGAACTCGACACGGCGTTCGTT 9678 || || |||||||| | | || || | || ||||| || ||| || || || Sbjct 1050 AGTGTAGGTGAGCAGGTTTTATTGCTTTCCATCGGTGGTGAGCTAACCACCGCCTTTGTA 991 Query 9679 CTGCCGGGGATTTATTCCGGCGATAACCCCGCGCCGTCTGCGTCGGCGGATGCCCTGCAT 9738 |||| | ||||| ||| |||| || || || || | || | || || |||| Sbjct 990 TTGCCAGCGATTTTCTCCAACGATTTTCCGGCACCCTCAACATCTCCCGAAGCGACGCAT 931 Query 9739 ATCCGT-TTCCCTGACGGGGCGGTGATTGAGTATGAACCCGAAACCAGTGCACTCACGGT 9797 | |||| || || || || || ||||| ||||||||||| || || | ||| | ||||| Sbjct 930 A-CCGTATTTCCAGATGGCGCAGTGATGGAGTATGAACCGCAATCCGGCGCATTGACGGT 872 Query 9798 AAGCGGAATTAAAACGGCCAGCGTGACGGCTTCTGATTCTGT 9839 || || |||||||| |||| || ||||| || || ||||| Sbjct 871 AACAGGTATTAAAACCGCCACAGTAACGGCATCAGAATCTGT 830 >seq2689 Length=1181 Score = 102 bits (112), Expect = 2e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 11590 GGTGGAGCCGCTCGGCTATCTCATTAACGTAAAGGAATGGTGGGAGACAAACGACCCGCC 11649 ||| || ||| |||||||| | ||| | | | ||||||||| ||| ||| |||| Sbjct 1181 GGTTGAACCGTTCGGCTATTTAATTCGCCTTATTGAATGGTGGCAGAACGGCGATGCGCC 1122 Query 11650 CGGAACCTTTCGCCTTGATATCGGTGTGCTGGAAAGCGGTATCACGGAGGAGATGTATCT 11709 ||| ||||| || || |||||||| ||| |||| | ||| ||||| || | | |||| Sbjct 1121 CGGCACCTTCCGGCTGGATATCGGCGTGATGGACACCGGCATCACCGAAGCCACCTATCA 1062 Query 11710 GGAAATGGAACGGCTGATTGCCGATGCCAAACCCGCAAGTCGCCATCTTATCGG 11763 || |||||||||||||| ||||| |||||||| |||||||| || || Sbjct 1061 CGAGCTGGAACGGCTGATTTTTGATGCGAAACCCGCTTCCCGCCATCTGATTGG 1008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98204659945920