Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq2814 697 0.0 seq2546 150 5e-32 seq348 95.1 3e-15 >seq2814 Length=35408 Score = 697 bits (772), Expect = 0.0 Identities = 1093/1555 (70%), Gaps = 18/1555 (1%) Strand=Plus/Minus Query 494 GACAAGGTGAAGAACCTCGAGCTTATTGGTAAGCACGTCGACGTCAACGCGTTCAAAGAA 553 ||||||||||||| | |||||| | ||||||||||| ||||| ||||| ||| || Sbjct 19796 GACAAGGTGAAGATATTAGAGCTTGTCGGTAAGCACGTTGACGTTAACGCATTCCGTGAG 19737 Query 554 CGCCTGGAGGTTTCCGGTACCGTAACGATTGCCGACCGAATGGCGAAG--GCCCGCCGCC 611 ||| |||| || | ||||| ||| || | | ||| | | || ||| Sbjct 19736 CGCTATCAGGT---CGAT---GTAACTATTTCC---CTTGCTGATAAGTTGGCAGCAGCC 19686 Query 612 GCGTAAAAGAGCAGGCAGGTGGTGAAGAATGACAGCCGCAGCCATATCGACGGAAGAGCA 671 ||||| | || | |||||||| ||||| | |||||| || | ||||| || Sbjct 19685 -CGTAAGCGTGCCA-CTGGTGGTGAGCAATGATTGA---AGCCATGTCACCAGAAGAACA 19631 Query 672 ACTCGTAGAGGATATCGCCTCGTTCACGTATGACCCGCTGGGCTATGCGCTGTACGCGTT 731 ||| | | ||||||| | ||| ||| |||||||| | ||||||| || || || || Sbjct 19630 ACTGATTAACGATATCGGCATGTTTACGCATGACCCGTTAAGCTATGCACTATATGCTTT 19571 Query 732 TCCGTGGGGAGAGGATGGCACAGAGCTGGCGCATGCCACCGGGCCCAGAAAGTGGCAGGC 791 ||| ||||| || | ||| || || || | |||| | ||||| | | ||||| || Sbjct 19570 TCCTTGGGGGGAAGCTGGTACCGAACTTGAAAATGCAAGTGGGCCTCGTCAATGGCAAGC 19511 Query 792 TGATGCATTTCGTGAGATACGCGATCACCTCCAGAACCCCGCGACACGTCACCAGCCGCT 851 ||| | || ||| ||| | || || | | || || | || || ||||| | Sbjct 19510 CGATACGTTAAATGAAATAGGTGAACATTTACGTAATCCTGAAACGCGATTTCAGCCATT 19451 Query 852 GATGCTGGCCCGCGCATCCGGCCACGGCATCGGTAAATCTGCTTTCATCTCGATGCTGAT 911 || | | |||||| || ||||| || || ||| ||| ||| |||||| | || Sbjct 19450 ATTGATATCTGTCGCATCAGGTCACGGTATTGGGAAAAGTGCGAACATATCGATGATCAT 19391 Query 912 TAACTGGGGCATGTCCACCTGCGAGGACTGCAAGGTGGTGGTGACCGCCAACACCGACAA 971 || ||||||||| ||||||||| || || |||||||| || || || |||||||| || Sbjct 19390 CAAGTGGGGCATGGACACCTGCGAAGATTGTAAGGTGGTTGTCACTGCTAACACCGAAAA 19331 Query 972 CCAGTTGCGCACCAAGACCTGGCCTGAAATCATCAAATGGTCAAATCTGGCTATCACGAA 1031 |||| | || || || || ||||| ||||| || ||| | || ||||||| || Sbjct 19330 CCAGCTACGAACTAAAACATGGCCAGAAATTGCGAAGTGGCAACGCCTATCTATCACCAA 19271 Query 1032 AGAGTGGTTCACCTGCACCGCTACCGCGATGTACAGCAATGATCCCGGCCATGACAAACG 1091 || ||||| |||||||| || || || ||| |||||| || || | | || | Sbjct 19270 GGACTGGTTTACCTGCACAAAAACAGCTATCTACTCCAATGACCCAAATCACG-CTAATG 19212 Query 1092 C-TGGCGTGCCGATGCTATCCCATGGTCTGAGCACAACACAGAAGCATTCGCAGGGCTGC 1150 | |||||||| |||||| | || ||||| ||| |||||||||| |||||||||||||||| Sbjct 19211 CATGGCGTGCTGATGCTGTGCCGTGGTCAGAGAACAACACAGAGGCATTCGCAGGGCTGC 19152 Query 1151 ACAACGAGCGCAAGCGCATCATCGTGGTATTCGACGAAGCATCCAACATTGCCGATCTGG 1210 | || || ||||||||||||| | | ||||| || || || |||||||| ||||| | Sbjct 19151 ATAATCAGGGCAAGCGCATCATTCTAATTTTCGATGAGGCTTCAAACATTGCGGATCTTG 19092 Query 1211 TGTGGGAAGTAGCAGAAGGCGCGCTGACGGACGAAGACACCGAAATCATCTGGGTGGCGT 1270 |||||||||| || || || || |||| || || | || |||||||||||| | |||| Sbjct 19091 TGTGGGAAGTCGCTGAGGGTGCTTTGACAGATGAGAATACAGAAATCATCTGGATAGCGT 19032 Query 1271 TCGGTAACCCGACGCGTAACACCGGGCGTTTCCGTGAATGTTTCCGCAAGTACAAACACC 1330 | ||||||||||| |||||||| ||||||||||| || |||||||| |||| || |||| Sbjct 19031 TTGGTAACCCGACACGTAACACAGGGCGTTTCCGCGAGTGTTTCCGTAAGTTTAAGCACC 18972 Query 1331 GCTGGAAGTGCGCGCAGATTGACAGCCGCACCGTTGAAGGCACTAACAAGCAGCAGTTGC 1390 ||||||| ||||||||| ||||| || ||||||||||| ||||| | ||| | Sbjct 18971 GCTGGAAAACTAAGCAGATTGATAGCCGTACGGTTGAAGGCACGAACAAAGAACAGATTG 18912 Query 1391 AGAAGTGGGTAGACGACTACGGCGAGGAAAGCGACTTTGTTAAAGTTCGTGTGCGCGGAA 1450 | || ||| | || ||| |||||||| ||||||||||||||||||||||||||||| | Sbjct 18911 ATAAATGGATTGAAGACCGGGGCGAGGATAGCGACTTTGTTAAAGTTCGTGTGCGCGGTA 18852 Query 1451 TATTCCCTGATGCGTCTGAATTGCAGTTCATCCCGACAGGCCTCACTGACGAGGCAATGA 1510 | ||||| | |||||| || ||||| || || ||| | ||||| | || |||| Sbjct 18851 TCTTCCCATCAACCTCTGAAACTCAATTCATACCTACTGGCTTAACTGATGCAGCCATGA 18792 Query 1511 AGCGCGTTGTTACCGCGGCGCAGGTAGCGCATGCACCAGTGATTATCGGCGTCGACCCGG 1570 ||||| || || || | ||| | || |||||| | || || ||||| ||||| | Sbjct 18791 AGCGCACAGTAACGCAAGCCGAAGTATCACACGCACCAATTATCATAGGCGTTGACCCTG 18732 Query 1571 CATATTCCGGCGTGGATGATGCGGTTATATACCTGCGGCAGGGGCTGCACAGCAAAGTGC 1630 |||| ||||| | |||||||||||||| || | || || || |||||||||||| | Sbjct 18731 CATACTCCGGTGATGATGATGCGGTTATTTATTTACGCCAAGGACTGCACAGCAAATGCC 18672 Query 1631 TCTGGACCGGCAACAAGACCACCGATGATTTGATTATGGCGAAGCGCATCGCCGACTTTG 1690 | ||||| || ||||| || || || ||| | ||||||| ||||| || || |||| || Sbjct 18671 TGTGGACGGGTAACAAAACTACTGACGATATCGTTATGGCAAAGCGTATTGCTGACTATG 18612 Query 1691 AAGACCAGTACCAGGCTGATGCAGTATTTATCGACTTCGGTTACGGTACCGGGCTGAAGT 1750 | || ||||| ||||||||||| ||| ||||||||| || || ||||| || | | | Sbjct 18611 AGGATCAGTATCAGGCTGATGCTGTACATATCGACTTTGGCTATGGTACGGGTATTTATT 18552 Query 1751 CAATCGGTGACGGATGGGGCAGGACGTGGCAGTTAATCCCGTTCGGCGGCGGCTCGACAG 1810 | | ||| | ||||| | |||||| | | | ||| |||| || || | Sbjct 18551 CTGTTGGTATGAGTTGGGGGCGTGATTGGCAGCTTGTGCAATTCAATGGCGCATCAACTG 18492 Query 1811 ACCCTCAGATGCTCAACAAGCGCGGCGAGATGTTCAACAGCTGCAAAACATGGCTGAAGC 1870 |||| || |||| ||||||||||| || |||| |||| || ||||||| ||| Sbjct 18491 ACCCACAAATGCAAAACAAGCGCGGTGAAATGTATAACAATGTTAAGTCATGGCTCAAGA 18432 Query 1871 TCGGCGGCGCGCTGGATGATCAGGAGACGGCTGATGACCTGTCGGCGGCAGAGTACAAAG 1930 | || || || | || |||||||| || || || | || | | |||||||||| Sbjct 18431 TAGGTGGGGCTATTGACGATCAGGATGTTGCAGAGGATTTATCAACCCCTGAGTACAAAG 18372 Query 1931 TCAGGGTTGACGGCAAGATCGTCATTGAGCCGAAGGAGGATATCAAAGAGCGCTTAGGCC 1990 || | || || || || | || | |||| ||||| ||| | || | || | Sbjct 18371 TCGAACTAAGTGGTAAAATACTCTTAGAATCCAAGGTTGATATTAAAAAACGTATTGGAC 18312 Query 1991 GCTCGCCGGGCAAGGGTGACGCGCTGCTGCTGACGTTTGCTTTCCCGGTTACGAA 2045 |||| ||||| || ||||| || || | || ||||||| ||| || || || Sbjct 18311 GCTCACCGGGTAAAGGTGATGCACTAGCATTAACATTTGCTTACCCAGTAACAAA 18257 Score = 601 bits (666), Expect = 9e-168 Identities = 1557/2355 (66%), Gaps = 46/2355 (2%) Strand=Plus/Minus Query 8031 GGATGATTAATGGCTTCTGTTATCGAGATCTGCAACCGCGCGCTGAGCAACATCGGCAAC 8090 || ||| ||||||| || | || || ||||| ||| ||||| ||| || || || Sbjct 12961 GGGTGAATAATGGCCTCAGAAATTGAAATCTGTAACTTAGCGCTTAGCCGTATTGGTAAT 12902 Query 8091 AGTCGCAGCATTAACAGCCTGATTGAAGCCAGCAAAGAGGCCGGGCAATGCTCCCTGCAT 8150 || || |||||||||||| | ||| |||||||| || | ||||||| | || Sbjct 12901 AGCCGATTCATTAACAGCCTTAGCGAAAAGAGCAAAGAAGCGGAGCAATGCAATTTACAC 12842 Query 8151 TTTGATGCGTGTCGCGATGCTGCTCTGGCTGACTTCGACTGGAACTTTGCTACCAAGCGC 8210 || || || |||||| || | || |||| || ||||||||||| | |||||| Sbjct 12841 TTCAATCATTGCCGCGATACTACGCTATCTGATTTTCCGTGGAACTTTGCCAGTAAGCGC 12782 Query 8211 GTGGCGCTGGCTGATACCAATAATCCTCCTCCGGACTGGCAGTACGCTTACCAGTACCCA 8270 || || ||||||||||||| || || || || |||||| ||| || ||| |||||| Sbjct 12781 GTTGCTTTGGCTGATACCAACAACCCACCGCCAGACTGGAAGTTTGCCTACAGCTACCCA 12722 Query 8271 TCTGATTGCGTCCGTATAACCGAGATCATGCCTACCGGC-ATACGTAATCCTACCGCTGC 8329 | || || | || | || || | | ||| | | || |||| | || | Sbjct 12721 ACCGACTGTTTAAAGGCAATAGCCATTATTCAATCTGGCCAGAAATA-TCCT-CAGCCAC 12664 Query 8330 TCAGCGCATTGAATATGTTG-TCGGTTCCAATGAAGACCTGACAGGTAAGTTAATTTACA 8388 | ||| | ||| | ||| | ||||| ||| ||| ||||| || | |||||| Sbjct 12663 ATAATGCAATTAATTTCTTGGTGGGTTCGGATGCTGACGGTACAGGAAAACTGATTTACT 12604 Query 8389 CCGATCAGCCGAAAGCGTGGTTGAAGTACATGGCGCGGGTTACTGACGTCAATATGTATG 8448 ||| |||||| |||| ||| | | |||| ||| || || || || ||||| | || Sbjct 12603 GCGACCAGCCGCAAGCATGGCTTCAATACACTGCGTCAGTCACCGATGTAAATATATTTG 12544 Query 8449 ATGCCATTTTTATGGAGGCGCTTTCCTGGCGTCTGGCTGCTGCCATCAATATGGCGC--T 8506 | | | || || || ||||| | |||||| | |||| || | | | || | | Sbjct 12543 ACTCATTATTCATTGATGCGCTGGCATGGCGTTTAGCTG--GCGAACTAGCACGCCCATT 12486 Query 8507 GACTGGTAGCGCAGATCTCGGTAACAATGCACTGACGATGTACAACCGTGT-GATCCTGA 8565 | || || || | | || ||| | ||| | |||||||| | ||| ||| | Sbjct 12485 GGCTTCTAATGCTGGTATCAGTAGTGAAGCATTTCAGATGTACA-CAATGTCGATTGCTA 12427 Query 8566 GCGCTGGCTCACATAGCCAGAATGAATCGCAGGAGCCACAACCACCAG-TAGATGAGTTC 8624 ||||| | ||| || ||||||| ||||| ||| | | | || ||| Sbjct 12426 ATGCTGGTGCGCATTCCCTTGATGAATCATCAGAGCCT-AACGATTACATGGACCCATTC 12368 Query 8625 ACAGCAGCGAGGTTGTCATAATGGCTTTTAGCTGGATTCAACCGAGCTTTGCCGGTGGTG 8684 || | ||||||||| || ||||||||| |||| ||||||||||| ||| | ||||| | Sbjct 12367 ACCGAAGCGAGGTTATCGTAATGGCTTATAGCATCATTCAACCGAGTTTTTCTGGTGGCG 12308 Query 8685 AAATTGGTCCGTCACTGTATGGCCGCATTGATATGTCAAAGTATCAGGTGGCACTGCGCA 8744 |||| | || || ||||| || |||||| | |||| || || | || | Sbjct 12307 AAATCGCACCTAGCCTTTATGGGCGTATTGATCTAGCAAAATACTCTACCGCTTTACGTA 12248 Query 8745 AGTGCGATAACTTCATTGTTCGCCAATATGGCGGTGTAGAGAACCGACCTGGTACGCGCT 8804 |||| || ||||| |||| || ||||||||||| | || || |||| || || | Sbjct 12247 AGTGTGAAAACTTTCTTGTGCGTCAATATGGCGGCATTGAAAATAGACCAGGAACTAAGT 12188 Query 8805 TTGTTGGTCCTGCTAAATACCCTGATCGCAAGTGCCGGTTAATCCCGTTCCAGTTCTCGA 8864 || ||| | || ||||||||| | || ||||| || ||||||||||||||| | Sbjct 12187 TTATTGCGGCGGCAAAATACCCTAACAAGAAATGCCGCTTGATCCCGTTCCAGTTCAGCA 12128 Query 8865 CCGTCCAGACATACGCGCTGGAGTTCGGACATAACTATATGCGCGTTATCAAAGATGGCG 8924 |||| || || ||||| || || | || |||| || |||||||| ||||| || || | Sbjct 12127 CCGTGCAAACTTACGCCCTTGAAATGGGTGATAAGTACATGCGCGTGATCAAGGACGGTG 12068 Query 8925 CTTATGTTCT-------GAC---GACCAGCAATGTGATTTAT--GAGCTGGCGATGCCGT 8972 | || || ||| || || | | || ||| || || || | || | Sbjct 12067 GGCAGGTGCTTTATGCAGACAGTGAGCACAAGGGCGAAATATTCGAACTTGCAACACCTT 12008 Query 8973 ATGCTGACACTGACCTTTTCCGCATTAAATTCACGCAGAGCGCCGATGTTCTGACGCTGG 9032 || || |||| || ||| | ||||| || ||| || || || |||| | | Sbjct 12007 ATAACGAATCTGATCTATTCAATTTAAAATTTACACAGTCAGCAGACGTAATGACTATCG 11948 Query 9033 TGCATCCTGCATACCCGCCTAAAGAACTGCGCCGCTATGCGCACGACAACTGGCAGATCG 9092 | ||| ||| || || || | ||||| | ||||||| || ||| | ||| | | | Sbjct 11947 TACATGCTGATTATCCACCGATGGAACTACAGCGCTATGATCATGACGATTGGAAACTAG 11888 Query 9093 TCGACGTCACCACCAAAAACGGGCCGTTCGAAGATATCAACGTTGACGA-GACGGTGAAG 9151 | || || || || || ||||||||||||||| || | || || ||| Sbjct 11887 TTCCTGTTGAAACGCGCAATGGCCCATTCGAAGATATCAACACGGATAAAGAGCGT-AAG 11829 Query 9152 GTCTACGCCAGCGCCAGCACCGGAACAATTACACTGACGGCAAGCTCTGCAATATTCGGC 9211 | || | |||||||| || || | || |||||||||| | || || || Sbjct 11828 CTATATGTTAGCGCCAGTACAGGTGATGTAACGCTGACGGCAACGCATAATATCTTTGGT 11769 Query 9212 GCTGAGCAGGTCGGAAAATTGTTCTATCTCGAGCAGCCCGCGGTTGATTCCGTCCCGGTA 9271 ||||| ||| || ||| | ||| | ||||||| || ||||| | || || || Sbjct 11768 GCTGAATTGGTTGGCAAACAAATTTATATTGAGCAGCAAGCAATTGATGCTGTACCAGTT 11709 Query 9272 TGGGAAACCAGTAAAACCACAGCAATAAACGACGTTCGTCGTGCAGACAGCAACTACTAC 9331 |||||||| || || || | || || || ||||||| || |||||| Sbjct 11708 TGGGAAACTGACAAGACAACTAACGTTAATGATCAACGCCGTGCAGGTGCTAATTACTAC 11649 Query 9332 CGCGCTAATACCTCAGGAAAGACCGGGACCCTTCGCCCTTCGCATACCGAGGGAATGTCG 9391 || |||||||| |||| || | ||| || | | || || || || || || ||| Sbjct 11648 CGAGCTAATACTGCAGGTAAAAGCGGAACATTAAGGCCATCACACACAGAAGGTATGAGC 11589 Query 9392 TGGGATGGCTGGGGCGGTACGGGTTCAGATGATACCGGGATCCAGTGGGAGTACCTGCAC 9451 |||||||| ||||||||| || | || || |||||||| ||||| || Sbjct 11588 TGGGATGGGTGGGGCGGT------------GACGCTGGTATTCAGTGGGAATACCTTCAT 11541 Query 9452 AGCGGTTTCGGCATTGCAAAAATCACAGCAGTGGCTGGC---GATGGCCTGACAGCAACT 9508 || ||||||||||| | ||||||| | || | || || || | ||||| || Sbjct 11540 AGTGGTTTCGGCATCGTTAAAATCAATTCTGT---TAGCACTGACGGTTTAACAGCTACG 11484 Query 9509 GCCGATGTGGTTTCGTTCATTCCATCTCAGGTTGTTGGATCCGCTAACGCCAGTTATAAG 9568 | | || ||||| | ||||||||| | | ||||| | ||||| | || ||| Sbjct 11483 GGTAAAGTTGTTTCATACATTCCATCAAATGCCGTTGGTGAAGAAAACGCTACGTACAAG 11424 Query 9569 TGGGCGAAATACGCGTGGAACAGCGTTAACGGATACCCGAGTACCGTTGTTTACTACCAG 9628 ||||| | | ||||| || |||| ||||| || || ||| | || || ||| Sbjct 11423 TGGGCTCGTTCGGTTTGGAATGATGTAGACGGCTACCCAAGCACTGTTATGTATTATCAG 11364 Query 9629 CAGCGCCTGTACTTTGCTGCGTCTACCGCGTACCCGCAAACCATCTGGGCAAGCCGTACC 9688 ||||| | | ||||||| ||| || || || ||||| || ||||| || |||| Sbjct 11363 CAGCGGTTATTTTTTGCTGGCTCTCGTGCTTATCCTCAAACGATTTGGGCGAGTCGTAGT 11304 Query 9689 GGAGACTATAAAGACTTCGGTAAGAACAACCCTATTCAGGATGATGATCGGATTATCTAC 9748 || |||||||||||||| |||||||| ||||| || || |||||||| || || |||||| Sbjct 11303 GGGGACTATAAAGACTTTGGTAAGAATAACCCCATACAAGATGATGACCGTATCATCTAC 11244 Query 9749 ACCTACGCAGGGCGTCAGGTGAATGAGATCCGTCATCTTATTGATGTTGGTAACCTGGTC 9808 ||||| |||||||| || || ||||| || ||||| | |||||||| ||| ||||| Sbjct 11243 ACCTATGCAGGGCGCCAAGTTAATGAAATTCGTCACTTAATTGATGTGGGTTCGCTGGTG 11184 Query 9809 GCTCTGACATCTGGCGGGGAATATACGATATCCGGGGACCAGAATAAGGTCCTCACACCG 9868 || | || ||||| || || ||| || | ||||| ||||| || || | || || Sbjct 11183 GCCTTAACGTCTGGTGGTGAGTATCAAATCACTGGGGATCAGAACAAAGTATTAACGCCA 11124 Query 9869 TCGGCGTTT-TCGTTCAGCTCTCAGGGGAATAACGGATCCAGTAACGTACCACCTATCGC 9927 | |||| || || || || || ||| || | ||| |||| |||||||| || Sbjct 11123 A-GCAGTTTCTCTTTTTCTTCGCAAGGTGCTAATGGCTGTAGTGACGTTCCACCTATTGC 11065 Query 9928 TGTGGCTAATATCGCGTTGTTTATCCAGGAGAAGGGTAGCGTTGTGCGTGATCTGGCGTA 9987 || || ||||| || |||| |||||||| || ||||||| |||||||| || || || Sbjct 11064 CGTTGCCAATATTGCCTTGTACATCCAGGAAAAAGGTAGCGCAGTGCGTGACCTCGCATA 11005 Query 9988 TTCGTTTGATGTTGACGGGTACCAGGGTACGGACCTGACCATACTGGCAAACCACCTTTT 10047 ||| || || |||||||||||||| ||||| || | ||||| |||| || ||||| || Sbjct 11004 TTCATTCGACGTTGACGGGTACCAAGGTACCGATTTAACCATCATGGCTAATCACCTATT 10945 Query 10048 CCAGAAACATAGCATTGTTGACTGGTCATTCTGCATTGTTCCTTACAGCAGCGCATTCTG 10107 || || ||| |||| ||| | || | || ||||||||| | || | || Sbjct 10944 TCAACGCCACCAGATTATTGATTGGGCGTTTTCTATCGTTCCTTACTCAATAGCCTGGTG 10885 Query 10108 CATTCGTGATGACGGTAAATTGCTGGTGTTGACCTATCTGCGCGACCAGCAGGTTTTCGC 10167 ||||||||||| ||||||||||| ||||| || ||| | || ||||| || || || Sbjct 10884 TATTCGTGATGATGGTAAATTGCTTTCATTGACGTACCTGAGAGAGCAGCAAGTGTTTGC 10825 Query 10168 CTGGGCGCCACAATCCAGCGCTGGAAAGTACGAAAGCACATGCTCCATCAGTGAAGGCAG 10227 |||||||||||| | | || | | ||| || ||| ||||||||||||| Sbjct 10824 TTGGGCGCCACAAGAAACTGACGGGCAATTTGAATCAACTTGCAGTATCAGTGAAGGCAA 10765 Query 10228 CGAGGATGCTGTTTACTTCGTGGTTAACCGTACTATCAATGGGCAGACCGTACGTTACAT 10287 || ||||| ||||||||| | || ||||| | ||| |||||||||||||| Sbjct 10764 TGAAGATGCGGTTTACTTCATTGTGTGCCGTAAAGTTGGTGGCGGTACCGTACGTTACAT 10705 Query 10288 CGAACGCCTGTCCAGTCGCCTGTTCACCAATGATGAAGACGCATTCTTTGTAGACTGCGG 10347 || || | ||||| || || ||||| || || || |||||||| || | || Sbjct 10704 AGAGCGTTTAAGTAGTCGTCTATTTACCAAAACAGAGGATGCTTTCTTTGTTGATTCAGG 10645 Query 10348 ACTGAGCTACGACGG 10362 || ||||| ||||| Sbjct 10644 CCTTAGCTATGACGG 10630 Score = 379 bits (420), Expect = 5e-101 Identities = 1012/1525 (66%), Gaps = 31/1525 (2%) Strand=Plus/Minus Query 3176 TGCTGACTGGTGCGCAGGGTGACACCTCAA--CCGCAAACACCAGCGGTAAAACGCTGCT 3233 |||| || |||||||||||| ||| | ||| | ||| ||||||||||||||||| || Sbjct 17855 TGCTAACAGGTGCGCAGGGT-ACAAC-CAATGCAGCATCAACCAGCGGTAAAACGCTACT 17798 Query 3234 TGGTCAGTAACGGAGTAGGCAGAGATGGCGGAAACCGAA-AAAG-AGCGCCTGCTGAAGC 3291 ||||||||||| | || ||||| | | |||| || | | || | Sbjct 17797 TGGTCAGTAACCTAACGGG-------GGCGGTATGAGTTTAAAGCAGGATTTATTAAAAC 17745 Query 3292 AACTCGCACAGCTGAAGAATGAGCGCACATCGTTCGAATCGCACTGGCTTGATCTGAGTG 3351 ||||| | ||||| |||||||||||| ||| || || |||||||| || || | Sbjct 17744 AACTCTCGCAGCTTAAGAATGAGCGCCAATCATTTGAGCCGCACTGGAAAGAGCTTGCAG 17685 Query 3352 ACTTCATCAATCCGCGTGGTTCCCGCTTTCTGACGTCTGATGTAAACCGTGATGATCGCC 3411 | | | || ||| | | || ||| || || || || || || | |||| | | Sbjct 17684 AGTATACGCGCCCTCGTAGCACTCGTTTTAACACATCAGAAGTTAATCGCGGTGATAGAC 17625 Query 3412 GTAACACCAAGATTGTTGACCCT--ACTGGCTCAATGGCTCAGCGCATTCTGTCCAGCGG 3469 |||| || || || |||||| | |||| ||| | |||| | | | || || || Sbjct 17624 GTAATACGAAAATCATTGACCAAGAAGCGGCTAAAT--CAGAGCGTACTTTATCAAGTGG 17567 Query 3470 CATGATGTCAGGCATCACCAGCCCGGCACGTCCGTGGTTCAAACTGGCAACGCCTGACCC 3529 |||||||||||| || |||||||| || ||| |||||| | || || || || || Sbjct 17566 CATGATGTCAGGGATAACCAGCCCCGCCCGTAAATGGTTCCGTTTAGCTACACCAGATCC 17507 Query 3530 TGACATGATGGACTATGGCCCGGTGAAAATCTGGCTGGAAGTCGTGCAGCGCCGCATGAA 3589 |||||||||| ||||| |||| || ||||| ||||| ||||| || ||| |||||||| Sbjct 17506 TGACATGATGAACTATAGCCCTGTCAAAATGTGGCTTGAAGTGGTTGAGCAGCGCATGAA 17447 Query 3590 CGAAGTGTTCAACAAGTCTAACCTGTATCAGTCACTGCCTGTAATGTACGCAAGCCTGGG 3649 |||||||||||| || || | ||||||||||| || || || | | || Sbjct 17446 TGAAGTGTTCAACCGTTCCAATATCTATCAGTCACTACCGCAAACTTATTCCGATATCGG 17387 Query 3650 TACTTTCGGCACCGGCGCTATGGCTGTTATGGAAGATGACCAGGACGTGATCCGCACAAT 3709 || || | |||| |||| | ||||| |||||||| || || || || ||||| | Sbjct 17386 CACCTTTGCCACCAGCGCATTAGCTGTACTGGAAGATAACGAGCGAGTTATTCGCACTGT 17327 Query 3710 GCCTTTCCCTATTGGCAGTTACTACCTGGCTAACAGTCC-GCGCGGTAGCGTAGACACCT 3768 |||||| || | || || || ||| | ||||| | || | | | | || || |||| Sbjct 17326 GCCTTTTCCAGTAGGTAGCTATTACATTGCTAATGGGCCTGATCTG-ACAGTTGATACCT 17268 Query 3769 GCATTCGCCAGTTCTCCATGACCGTTCGCCAGATGGTGCAGGAATTCGGTCTGGATAACG 3828 | | || | ||| |||||| || |||||| |||| ||| ||||| || || || | Sbjct 17267 GTTTCCGTGAATTCAGCATGACGGTGCGCCAGTTGGTTATGGAGTTCGGGCTAGACAAAG 17208 Query 3829 TCAGTACATCCGTAAAAGGCATGTGGGAAAACGGCACGTATGAAACGTGGGTGGAGGTTA 3888 | ||| || ||| || | ||||| |||| ||| |||| | || | Sbjct 17207 TGAGTGAGCAGGTTAAAAGCCTATGGGACTCTGGCAGCTATAGCCAGTGGATCACCGTCA 17148 Query 3889 ACCACTGCAT-TACGCCTAACGTCAACCGCGACAGCGGGAAGATGGACAGCAAGAATAAG 3947 || | | ||| || || | || ||| |||||| ||| ||||| ||||| ||| Sbjct 17147 TTCATTCAGTCTAC-CCAAATTTAAATCGCATCAGCGGCAAGCTGGACGCTAAGAACAAG 17089 Query 3948 CCTTACCGCTCTGTCTATTTCGAGTCTGGCGGCGACTCCGACAAGC-TGCTGCGTGAATC 4006 | | || || || || || ||||| || || | || | || || ||||| Sbjct 17088 CTGTTTAAATCCGTTTACTTTGAAATGGGCGGTGATAGTGA-ACGCGTTCTACGCGAATC 17030 Query 4007 CGGTTTCGATGAATTCCCGATCCTGGCTCCTCGCTGGGAAGTGAACGGTGAGGATGTTTA 4066 || || ||||||||||| || |||| || || |||||||||||||| ||||| || || Sbjct 17029 TGGCTTTGATGAATTCCCTATTATGGCGCCACGTTGGGAAGTGAACGGCGAGGACGTCTA 16970 Query 4067 TGCCTCATCTTGCCCTGGCATGCTGGCGCTAGGTCAGGTTAAAGCCCTTCAGGTTGAGCA 4126 | |||||| ||||| || ||| | ||| ||||| || ||||| | ||| | ||| Sbjct 16969 CGGCTCATCGTGCCCCGGTATGATTGCGTTAGGTAGCGTGAAAGCATTGCAGCTATTGCA 16910 Query 4127 GAAGCGCAAAGCTCAGTTGATCGATAAAGCCACTAACCCGCCGATGGTTGCCCCGACATC 4186 || ||||| ||| ||| ||||||| ||| || || || ||| || || | || Sbjct 16909 ACGCCGTAAAGCACAGCAGATTGATAAAGTCACCAATCCACCTATGCAGGCGCCTGCCTC 16850 Query 4187 GCTCAAGAATCAGCGTGTTTCCCTGTTGCCTGGCGATGTGACGTACCTCGACGTAAT--- 4243 |||||||||||||| ||||||| ||||||| | | || ||| | || ||| Sbjct 16849 AATCAAGAATCAGCGTATTTCCCTTGTGCCTGGTGGAATAACTTACTT--AC-CAATGGC 16793 Query 4244 TAGCGGTCAGGACGGTTTCAAACCTGCCTACCTGGT-CAACCCGAATACCGCCGACCTGC 4302 | ||| | | | | ||||| | || || || ||| | | || | || Sbjct 16792 TGGCGCTGACCAAATGATTAAACCGATATTCCAAGTACAGGCCG-ACATTAACGGCTTGA 16734 Query 4303 TGGCTGACATTCAGGACACTAGGCAGACCATCAACAGCGCCTACTTCGTTGACCTCTTCA 4362 | ||||| ||| || || | | ||||| ||||| ||| |||||| |||| Sbjct 16733 TTGCTGATATTGGTGATGCTCGTAATCAAATCAAAGAAGCCTATTTCTCTGACCTTTTCA 16674 Query 4363 TGATGCTGCAAAACATCAACACCCGCTCTATGCCGGTGGAAGCGGTGATCGAGATGAAGG 4422 ||||||| || ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| Sbjct 16673 TGATGCTACAGAACATCAACACTCGCTCAATGCCAGTGGAAGCAGTTATCGAAATGAAGG 16614 Query 4423 AAGAGAAACTGCTGATGCTTGGCCCGGTGCTTGAGCGCCTGAATGACGAAGCGCTTAACC 4482 |||| || || || ||| | || || || | |||| | || ||| || | Sbjct 16613 AAGAAAAGCTTCTCATGTTAGGGCCTGTCTTACAGCGTTTAGATTCTGAACTACTAGATA 16554 Query 4483 CGCTTATCGATCGCGTGTTCTCAATCATGGCCCGCAAGAACATGTTGCCTGAACCGCCAG 4542 | | || |||| |||| |||||||||| || || ||| | || || | ||||||| Sbjct 16553 AGTTAATTAATCGTACGTTCGCAATCATGGCGCGTAAAAACCTATTACCAGTGCCGCCAG 16494 Query 4543 ACGTTCTTCAGGGTATGCCGCTGCGTATCGAGTACATCTCTGTGATGGCTCAGGCTCAGA 4602 | | | |||||||||| ||| | || ||||| || || ||||| ||||| |||| Sbjct 16493 AAGAAATGCAGGGTATGCAGCTTAAAGTTGAATACATTTCCGTCATGGCGCAGGCGCAGA 16434 Query 4603 AATCTATCGGCCTCACCAGCCTGTCGCAGACAGTTGGATTTATCGGGCAACTGGCGCAGT 4662 |||| | || | | |||| | || || || ||| | || || || | Sbjct 16433 AATCGGTTGGTGTTAACAGCGTTGAGCGTTTTGTCGGCTTTGTTGGTGGTCTAGCAAAAC 16374 Query 4663 TCAAACCTGAAGCGCTCGACAAGCT 4687 | ||||| |||||||| |||||||| Sbjct 16373 TGAAACCAGAAGCGCTAGACAAGCT 16349 Score = 111 bits (122), Expect = 4e-20 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 27953 GAACAGCCAGCACGCTGTTACATGAGGCAGGGTATCCATCAGACTGGATTGAAAAGGCGC 28012 ||||||||||||| | || |||||||| || | | || |||||||| || ||| Sbjct 34122 GAACAGCCAGCACATTATTGCATGAGGCTGGCTTTAATTCTGACTGGATAGAGAAGTGTT 34063 Query 28013 TGGCGCATGAACAGAAGGGAGTGCGAGCGGTATACAACAAAGCGGAGTATGCCAGGCAGC 28072 | || || ||||| || || || || || || || |||||||| |||||||| ||||| Sbjct 34062 TAGCCCACGAACAAAAAGGCGTACGTGCTGTTTATAACAAAGCAGAGTATGCAGAGCAGC 34003 Query 28073 GCGCCTACATGTTGCAGCAGTGGGCGGATATGGTTGATGCCTGGAT 28118 || | | ||||| ||||||||||| ||||||| |||| ||||| Sbjct 34002 GCCGCGATATGTTACAGCAGTGGGCTAATATGGTGGATGGTTGGAT 33957 Score = 102 bits (112), Expect = 2e-17 Identities = 189/276 (68%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 10942 TGAATATCCGCAGCGTGAATTTGAGTTCTACGACGATCCTGTTGATGACGCTACCGGCAA 11001 ||||||||| |||||||||||||||||||||||| | || ||||||||||| || || Sbjct 10071 TGAATATCCTCAGCGTGAATTTGAGTTCTACGACAACCCAGTTGATGACGCCACAGGTGT 10012 Query 11002 GGTCGAAGTGAAACTTGACAGCAACTGGGATAAAAACGGACGCGTTAAGGTTCGCCAGCT 11061 ||| || | || || || | ||| |||||||| || || | || | ||| Sbjct 10011 GGTAAAAATTAACCTCGATGCTCAGTGGAGCAAAAACGGCCGTGTGTATGTCAGACAGTC 9952 Query 11062 TGACCCACTTCCGCTTTCTGTTCTTGCTGTATTGCCTCGCCTTACCGTCGGAGGCTTCTG 11121 ||| || | || || ||| | | || || | ||||| | || || ||||||| Sbjct 9951 TGATCCGTTACCTCTATCTATCTTAGCGGTTATACCTCGTTTAGATGTGGGGGGCTTCTA 9892 Query 11122 AT--------GATTAAAGCTCAGATCGTACCCGCTACAGCAGAGCATATCGAAGCCATTA 11173 || || || | ||| ||||||||||| ||| |||||| | || | || Sbjct 9891 ATATGGCAAAGAGTATTGTTCAAATCGTACCCGCAACATTAGAGCA-CGCACAGGCGTTG 9833 Query 11174 TTCCA-CTTGTTCGCCAAGCTGATATCGATGAATTT 11208 | || | |||| | ||||||||||||||||||||| Sbjct 9832 GTACAGCATGTTAGACAAGCTGATATCGATGAATTT 9797 Score = 87.8 bits (96), Expect = 5e-13 Identities = 185/276 (67%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 26938 GTGCTTACTGATACCAAATTAAAAAACCTCAAACCGCAGGACAAACTGTATAAGGTTTCA 26997 ||| | || |||| |||||||| | | | || || | ||||| || |||||||| | Sbjct 35137 GTGTTAACCGATAAAAAATTAAAGAGCTTAAAGCCAGAAGACAAGCTATATAAGGTAGCC 35078 Query 26998 GATCGTGACGGGCTGTATGTTGCGGTGCTTACTTCCGGCTCCGTCTCGTTCAGGTACGAC 27057 ||||||||||| |||||||||| || | | || ||| | || || || || || Sbjct 35077 GATCGTGACGGTTTGTATGTTGCTGTTACAAAAACTGGTTCCATATCATTTAGATATGAT 35018 Query 27058 TACCGCATTAACGGACGACGGGAAACGCTGGTCATTGGTCAGTATGGTTGTGACGGTATC 27117 |||||| |||| || || | |||||| | |||| | || | ||||||||| Sbjct 35017 TACCGCTTTAATGGGCGTAGAGAAACGATAACGTTTGGACGCTACAGCGATGACGGTATT 34958 Query 27118 AGTCTGGCGGAAGCGCGTGAAGAACTCATTGCTGCAAAGAAGCTGCTAAAGGCAGGCCAC 27177 | || || ||||| | ||| || || | ||| || ||| ||| || |||||| Sbjct 34957 ACACTTGCAGAAGCAAGAGAAATGCTAATCGATGCCAAAAAGACGCTGAACGCAGGCGTA 34898 Query 27178 TCGCCAGCTGCGGCTAAACGTGACGGTATCAAAAAG 27213 || |||||| | || | |||||||| | |||| Sbjct 34897 TCACCAGCTTCACAGAAGAGAGACGGTATTACAAAG 34862 >seq2546 Length=22922 Score = 150 bits (166), Expect = 5e-32 Identities = 196/271 (72%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 261 AGGAACGCAATAAGCGCCTGCGCGTCAGTGCTGATTACGTGTTGCTTCGCCTGGTGGAAA 320 ||||||| ||||||| ||| || | ||| ||||| || | ||||| || |||| Sbjct 22122 AGGAACGTAATAAGCAACTGGGCATTGATGCGAGCTACGTACTGATGCGCCTCGTTGAAA 22063 Query 321 TAGACCAGATGGATGTGATCGACATCCTTAACGATGACATGAGTATCAAGCCGGTTTCCG 380 | ||||||||||| ||| ||||| || | | ||| |||| || |||||| | ||| Sbjct 22062 TCGACCAGATGGACGTGGCTGACATTCTGGAACAAGACCTGAGCATTAAGCCGTTATCCC 22003 Query 381 AATGGCCTAAGGTCTGGCGTCAGTATCTTACCGGTTTCGAGCTGGCCGACATGTTCGAAG 440 ||||||| | ||||| | |||| | | ||| ||| | ||||| || |||||||||| Sbjct 22002 AATGGCCGGAATCATGGCGACGGTATTTAAGCGGGTTCAATCTGGCGGAGATGTTCGAAG 21943 Query 441 GCCGCGGCGACGAGAAAGAACTTGTTGGCATACTCaaaaaaaTAAAATGGCCTGACAAGG 500 |||| ||||| ||| || | || || ||||||| || || |||||||| ||||||| Sbjct 21942 GCCGGGGCGATGAGCGCGATATGGTCGGGGTACTCAAGAAGATCAAATGGCCGGACAAGG 21883 Query 501 TGAAGAACCTCGAGCTTATTGGTAAGCACGT 531 | |||||||| || | | ||||| || || Sbjct 21882 TTAAGAACCTTGAATTGCTGGGTAAACATGT 21852 >seq348 Length=55286 Score = 95.1 bits (104), Expect = 3e-15 Identities = 277/419 (66%), Gaps = 6/419 (1%) Strand=Plus/Plus Query 34033 CTACTACAACGAAATCGACCAATTTGCAGCTCAATGGCTGCGTAACCTGATCGCCGGCGG 34092 |||||||| |||| || | | ||||| || ||| | || ||||| |||| | ||| Sbjct 40838 CTACTACAGCGAATGGGATCCCTACGCAGCGCAGTGGATCCGCAACCTCATCGATGCCGG 40897 Query 34093 TCATATCGCGCCAGGCGAAGTTGACGAAAGGAGTATTGAAGATGT-CACACCTGACGACC 34151 | ||| |||| ||| | || ||| ||||| || ||||| || ||| | |||| Sbjct 40898 GCTGATCCCGCCCGGCCATGTCGACACCAGGAGCATCACCGATGTTCAACCCTCA-GACC 40956 Query 34152 TGCGAGGTTTTACGCAGTGCCACTTCTTCGCCGGAATTGGCGTCTGGTCTCATTCCCTGC 34211 | || | ||| ||||||||||||||||| || | || |||||| | | | | Sbjct 40957 TCGCCGGATACCGGCAATGCCACTTCTTCGCCGGCATCGCCGGCTGGTCCCTTGCAGCTC 41016 Query 34212 GCCTCGCCGGATGGCCAGATGATAAAACAGTCTGGACCGGCTCCTGCCCGTGCCAGCCTT 34271 | || || || ||||| || || | ||||| ||| | |||||||||||| | Sbjct 41017 GACTTGCTGGCTGGCCCGACGACCGCGAGCTGTGGACGGGCAGCGCCCCGTGCCAGCCGT 41076 Query 34272 TCAGCGCGGCAGGCAAAGGAGATGGGTTTGCTGACGAGCGGCACCTTTGGCCACACTTCT 34331 || | || || || ||| | | | |||||| |||||||| ||||| |||||| Sbjct 41077 TCTCAGTCGCGGGTAAGGGAAAAGCCCAGGATGACGATCGGCACCTGTGGCCCCACTTCC 41136 Query 34332 TCCACCTCATCAGCGAGCG-CAGACCTCAGCATGTCTTTGGCGAACAGGTTGCAGCAG-G 34389 | | ||||||| | | || | | || | | ||| | || ||||||||||| || | | Sbjct 41137 TTCGCCTCATCCGTGCCCGACGGCCCGCTG-TCGTCATGGGAGAACAGGTTGCGGCGGCG 41195 Query 34390 TAACGCAAACACATGGTTCGACCTTGTACAAGCAGACCTGGAAGGAGTGGGATACACCT 34448 |||| || ||| ||||| || || |||||||||||| | | ||| ||| Sbjct 41196 GTTGGCAAGAAC-TGGCTCGACGGAGTGTCTGCTGACCTGGAAGGAATCGACTACGCCT 41253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126821286661344