Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq1458 104 1e-17 >seq1458 Length=11418 Score = 104 bits (114), Expect = 1e-17 Identities = 200/295 (68%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 10147 GCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGTTACCTGC 10206 |||||||||| || ||||| || || || || ||| ||||| ||||| || || ||| Sbjct 10868 GCGTAAACAAAGTTATTTTAGTGGGTAATTTGGGGCAGGATCCGGAAGTTCGCTATATGC 10927 Query 10207 CGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAGG 10266 ||| || | || ||||| ||||| ||| || ||| |||| | | || ||| Sbjct 10928 CGAATGGTGGAGCAGTTGCCAACATTACTCTGGCCACGTCCGAGAGCTGGCGTGATAAGC 10987 Query 10267 CGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGG 10326 | ||| || || | ||| || ||||||||||| || | |||||| |||| Sbjct 10988 AAACCGGTGAGATGAGAGAGAAAACCGAATGGCACCGAGTGGTCATGTTCGGTAAACTGG 11047 Query 10327 CTGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACATCGAGGGGCGCATCA 10386 | || ||| | ||| ||||||| || ||| | ||||| ||||| || | Sbjct 11048 CAGAAGTCGCTGGTGAGTACCTGCGTAAAGGCTCTCAGGTCTATATCGAAGGTGCTTTGC 11107 Query 10387 AGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGATCGT 10441 |||| || || ||||||||||| || ||||||||||||||||| || |||| Sbjct 11108 AGACCCGTAAATGGCAGGATCAGAGTGGTCAGGATCGTTACACGACTGAAGTCGT 11162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204290468992272