Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq2606 448 9e-122 seq2595 419 5e-113 seq2600 149 1e-31 seq2573 127 4e-25 >seq2606 Length=3143 Score = 448 bits (496), Expect = 9e-122 Identities = 1139/1717 (66%), Gaps = 82/1717 (5%) Strand=Plus/Plus Query 14923 GAAATTAATGACGGTACGCGTGTTATTTCCACAGT-AGCGACTGCGGTCGTCGGCATGGT 14981 |||||||| || ||||| ||| || | || || ||| || || |||| || ||||| Sbjct 248 GAAATTAACGAAGGTACTCGTACCATCACTACCGTTAGC-ACCGCTATCGTAGGTATGGT 306 Query 14982 TTGTACAGCCAGCGATGCAGATGCCACGCTATTTCCCCTCAATGAACCGGTACTGATTAC 15041 |||||| || || ||||| | | |||||| | ||| || || |||||||| Sbjct 307 TTGTACTGCTCCTGACGCAGACGAAAAAACATTTCCATTAAATACTCCAGTCCTGATTAC 366 Query 15042 CAATGTGCAAAGCGCCATTGCGAAAGCCGGTAAAAAAGGCACGCTGGCTGCATCACTGCA 15101 | || ||||||| || || ||||| |||||||||| || || |||| ||| | Sbjct 367 TGACGTTATGAGCGCCAGTGGCAAGGCCGGGGAAAAAGGCACTTTGTCTACATCTCTGAA 426 Query 15102 GGCCATCGCAGACCAGTCAAAACCCGTCACTGTTGTTGTACGTGTTGAGGATGG--AACC 15159 |||||||| | ||| | || || ||||| ||||| ||||| || || || || | Sbjct 427 AGCCATCGCTGCTCAGGCTCTGCCTGTGACTGTGGTTGTTCGTGTGGAAGAAGGCAAATC 486 Query 15160 GGCGATGACGAGGAAGCTGCGCTCGCACAGACTGTTTCCAACATTATCGGAGGT---ACG 15216 ||| || ||| | || || ||||| ||||| ||| || Sbjct 487 -----TGAAGAAGAAAC----------CA-----TTAGTAACATCATCGGTGGTGTTACC 526 Query 15217 GATGAGAACGGTAAATACACCGGTATCAAGGCTCTCCTGACTGCTCAG-GCCGTCACCGG 15275 ||||| ||||| | |||||||| |||| || || | || || ||| | | || Sbjct 527 GATGAA---GGTAAGAAAACCGGTATGCAGGCGCTGTTGGCGGCACAAAGCCAGCTC-GG 582 Query 15276 CGTCAAGCCGCGTATTCTTGGGGTGCCGGGGCTGGATACTAAAGAGGTCGCGGTCGCGCT 15335 || || || || ||||| || || || || ||||| | ||| || || | | || Sbjct 583 TGTTAAACCACGCATTCTGGGTGTTCCAGGTCTGGACTCAAAACCAGTTGCTGCTGAACT 642 Query 15336 TGCGTCGGCTGCCATTAAGTTACGT---GCATTTGCTTACGTCAGCGCGTGGGGATGTAA 15392 || | ||| |||| || ||| | || || |||||||| | || || || Sbjct 643 CGCCGCTATTGC---TAAGCAACTGAAAGCAATGGCATATGTCAGCGCTTATGGCTGCAA 699 Query 15393 GACTATTTCCGAAGCGATGGAATATCGTAAAAATTTCAGCCAGCGCGAGCTGATGGTTAT 15452 | ||| || |||| || |||||||| |||| ||| | ||||| ||| | ||| | || Sbjct 700 AAATATCTCTGAAGTTATCAAATATCGTGAAAACTTCGGTCAGCGTGAGGTAATGTTAAT 759 Query 15453 CTGGCCTGATTTCCTCGCGTGGGAC-ACCGTCAA-AAATACCACC-GCAACGGCTTACGC 15509 |||||||||||||| ||| || | || || || |||| || |||||||| Sbjct 760 TTGGCCTGATTTCCTGAGATGGAACAAAGGTGAAGTTATCGCACCTGCGACGGCTTA--- 816 Query 15510 CACTGCGCGTGCACTCGGCCTGCGTGCTTACATCGACCAGACTGTCGGCTGGCACAAAAC 15569 |||||| ||| ||||||| | |||||| | ||||||||||||||| Sbjct 817 ---------TGCACTGGGCTTGCGTGCCAAAATCGACGAAGAAACCGGCTGGCACAAAAC 867 Query 15570 CCTGTCTAACGTTGGTGTACAGGGCGTTACCGGCATCAGCGCCTCA-GTGTTCTGGGATT 15628 ||| || || || ||||| | ||||| || || | | | || | || ||||||||| Sbjct 868 CCTATCCAATGTGGGTGTTAACGGCGTAACGGGTCT-ATCTGCTGATGTCTTCTGGGATC 926 Query 15629 TGCAGGCATCCGGCACCGATGCTGACCTGCTCAACGAGGCCGGGGTTACAACGCTGGTAC 15688 |||| || | || || || ||||| ||||| ||| || | ||||| ||| | | Sbjct 927 TGCAAGCGACTGGAACTGAGGCTGATCTGCTGAACCAGAATCACATCACAACACTGATCC 986 Query 15689 GCAAGGACGGTTTCCGCTTCTGGGGTAACCGCACCTGC------------TCGGATGACC 15736 |||| ||||||| || ||||||||| ||||| ||| || || ||| Sbjct 987 GCAAAAACGGTTTTCGTTTCTGGGGTTCACGCACTTGCGCTGGCTCTGCTTCTGAGGACT 1046 Query 15737 CGCTTTTTCTGTTTGAGAACTACACTCGCACCGCGCAGGTACTGGCCGACACGATGGCCG 15796 | || || | || || | |||||| || ||||| ||||||||||| ||||| ||||| | Sbjct 1047 CACTGTTCCCATTCGAAAGCTACACCCGTACCGCTCAGGTACTGGCTGACACCATGGCTG 1106 Query 15797 AGGCGCACATGTGGGCGGTCGACAAGCCCATTACCGCCACGCTCATTCGTGACATTGTTG 15856 | ||||| |||||||| ||||||| || | ||| | |||| | || |||||| | | Sbjct 1107 ACGCGCATATGTGGGCAATCGACAAACCGCTGACCCCATCGCTGGTACGCGACATTATCG 1166 Query 15857 ACGGCATTAACGCCAAATTCCGCGAGCTGAAATCAAACGGCTACATCGTGGAGGGTAAAT 15916 | ||||| || || || ||||| || |||||| | |||||||||| | || ||| | Sbjct 1167 AAGGCATCAATGCTAAGTTCCGTGAACTGAAAGCGGGCGGCTACATCATTGACGGTCGTT 1226 Query 15917 GCTGGTTCGATGAGGAATCGAACGACAAGGAAACCCTCAAGGCCGGGAAACTGTATATCG 15976 |||||| || || || ||||| || || ||||| || || || |||||| |||| Sbjct 1227 GCTGGTATGACGACAAAATCAACGATAAAGACACCCTGAAAGCAGGCAAACTGACCATCG 1286 Query 15977 ACTACGACTATACACCGGTTCCGCCACTGGAAAGCCTGACCCTGCGCCAGCGTATCACCG 16036 | ||||||||||| || || ||||||||||||| | ||| | |||||||| || || | Sbjct 1287 ATTACGACTATACCCCTGTACCGCCACTGGAAAACATGATGTTACGCCAGCGCATTACAG 1346 Query 16037 ATAAATATCTGGTGAATCTGGCCGAATCGGTCAACAGCTAAGGAGCCTGAAACAACATGG 16096 ||| || ||| || || | || || |||| | ||||| || ||| |||| Sbjct 1347 ATAGTTACCTGATGGATTTCGCAAAAAGTATCAATAAATAAGGGGC---TAAC-TGATGG 1402 Query 16097 CACTACCCCGTAAACTCAAATACCTGAATATGTTCAATGACGGCCTCAGCTACATGGGTG 16156 || |||| || ||||| ||||| |||||| ||||||| || ||| || ||| ||| Sbjct 1403 CATTACCTCGCAAACTTAAATATCTGAATTTGTTCAACGATGGCAACAACTATCAGGGCA 1462 Query 16157 TTGTTGAATCCGTGACGCTGCCGAAACTGACCCGCAAGCTCGAAAACTATCGCGGCGGCG 16216 |||| ||| |||| || || || |||| |||||| || ||| ||| || || | | Sbjct 1463 TTGTCGAAGAGCTGACTCTTCCTAAGCTGAGCCGCAAACTGGAAGCCTACCGTGGTGCTG 1522 Query 16217 GTATGAATGGCGCGGCAGCGATTGACCTCGGCCTCGACGATGATGCGCTCACCGTCGAAT 16276 ||||||| ||| ||| | | || || || || || || | || | | |||| Sbjct 1523 GTATGAACGGCAGCGCAATGGTGGATCTGGGTCTGGATGAAGGCGCATTGGATGCGGAAT 1582 Query 16277 GGTCTGTCGGTGGCCTGCCTGATGTGGC-TCTGTGGGCGCAGT---ACGCCGCCCCGGGC 16332 || | || || | ||| || | |||| |||| | ||| | || | Sbjct 1583 TCACTCTGGGCGGTAT---TGA-GTCCCAACTGTACAAACAGTGGGGCATCGCTCAGGTC 1638 Query 16333 GCTGATGCTGTGCCGCTGCGTTTTGCTGGTTCTTACCAGCGTGACGACACCGGCGAAATC 16392 |||| ||| |||||| ||||| || |||| | || || ||||| || || | Sbjct 1639 ---GATGGTGTCATGCTGCGCTTTGCAGGCTCTTTTGAACGCGAAGACACAGGTGATGTG 1695 Query 16393 GTGGCGGTCGAGGTGGTCATGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAGAATAAG 16452 || || || || || || |||||||||||| | | ||| | || ||| ||||| Sbjct 1696 GTTGCAGTTGAAGTTGTTATGCGTGGCCGTTTTCAGGAATTTGATCACGGTACTTATAAG 1755 Query 16453 CAGGGTGAAAACACCTCGACCAAACTGTCGACTGTCTGCACCTACTACCGCCTCACGATT 16512 |||||||| ||||| |||||| | | | ||| |||| | || || Sbjct 1756 CAGGGTGATAACACTCAAACCAAAATTACCGCGAAAAACACTTACTTCAAACTGACCTGG 1815 Query 16513 GATGGCAGCGACGTCATCGAAATCGACACCGTCAACATGGTCGAGAAGGTGAACGGCGTC 16572 |||||| || | || ||||||||||||||||||||||| ||||| ||| ||| | Sbjct 1816 GATGGCGAAGAACTGATTGAAATCGACACCGTCAACATGGTTGAGAAAGTGGGCGGAGAA 1875 Query 16573 GACCGTCTGGAACAGCACCGCCGCGCAATCGGGCTGT 16609 || ||||||| |||||| || || || || || |||| Sbjct 1876 GATCGTCTGGCACAGCATCGTCGTGCTATTGGTCTGT 1912 >seq2595 Length=21780 Score = 419 bits (464), Expect = 5e-113 Identities = 1077/1628 (66%), Gaps = 24/1628 (1%) Strand=Plus/Plus Query 10449 GCGACATTCTGCTGACGCCGGTCGGCTCGCGGGTAATGCGTCGTGAATATGGCTCGCTCC 10508 |||| ||| | ||||| || || ||| || | ||| ||| || || || || | Sbjct 18773 GCGATATTTTACTGACTCCAGTAGGCAGCCGTATTGCGCGCCGTACTTACGGATCACTAC 18832 Query 10509 TGTCTGCGCTGATTGACATGCCGCAAAACCCGGCGCTCAGGCTGCAAATCATGGTGGCGT 10568 || ||| ||||||||| |||||| || |||||| ||||||| || | |||| |||| Sbjct 18833 TGCCTGAACTGATTGACTGGCCGCAGAATCCGGCGATCAGGCTTCAGGTGATGGCGGCGA 18892 Query 10569 GCTATTCCGCGATCCAGAAATGGGAACCACGCATCAGGCTTATCTCCATCAGCTTTGAG- 10627 ||| | |||| ||| ||||| || || | | ||| | ||||||| | || Sbjct 18893 GCTTTACCGCAATCAGTCGTTGGGAGCCGCGAGTGACGCTGACATCCATCACGATGGAAA 18952 Query 10628 CGCGGCGACACTGGCGAAATGTATGTCGATATTACCGGGATGCGTACCGATACCGGTGCG 10687 | | | || ||| |||| || ||||| || || | | | | ||| | Sbjct 18953 CCCTACAGGAC-GGCAGAATGGTGGTGGATATCACGGGTACTTATCACCAGTCCGCTAAA 19011 Query 10688 TCAGTTTCAACCACTGTTTCACTGAGTTAAATCACTATGGCAACCGTTGACCTGAGTCAG 10747 | ||||| | || | |||| ||| | ||| |||| | || | || ||| Sbjct 19012 GAATTTTCACTTTCGATTCCGGTGAGGTAAG---CAATGCCAACAATCGATTTAAGCCAG 19068 Query 10748 TTACCCGTTCCCGACGTGGTTGAGGAACTGGACTATGAAACCATCCTTGCGGAACGCATT 10807 ||||| || || ||||||||| |||||| || ||| | | | || || | Sbjct 19069 TTACCACCACCGGATGTGGTTGAGCCACTGGATTACGAACAACTGTTAGAAGAGCGTAAA 19128 Query 10808 GCGACG-CTGATTTCGCTCTATCCCGAAGACCAGCAGGAAGCCATCGCCCGGACGCTCGC 10866 ||| | ||||||||||| ||||| | ||| |||||||| || | ||||| || | Sbjct 19129 -CGAGGTCTGATTTCGCTTTATCCGGCAGATCAGCAGGATGCTGTTGCCCGAACATTGCA 19187 Query 10867 ACTTGAGTCTGAGCCAATTGTTAAATTGCTGCAGGAAAACGCCTACCGTGAGGTTATCTG 10926 ||| || || || || | || || |||||| | ||||| | ||||| || | | Sbjct 19188 ACTGGAATCAGAACCTTTGGTGAAGTTGCTGGAAGAAAATGTGTACCGCGAATTGCTTCT 19247 Query 10927 GCGTCAGCGTGTCAATGAAGCTGCACGCGCAGTGATGCTGGCTTATGCCATAGACAGTGA 10986 ||| ||||| || |||||||| || || || || ||| |||| ||| | | | ||||| Sbjct 19248 GCGCCAGCGCGTTAATGAAGCAGCCCGTGCGGTTATGGTGGCCTATTCAACCGGTAGTGA 19307 Query 10987 CCTCGATAATATCGGGGCGAATTTCAATGTTGAGCGCCTTGTCGTCACGCCTGCTGATGA 11046 || ||| | | || ||||| ||| || |||| | || | |||| ||| | Sbjct 19308 TCTGGATCAGCTGGGCTCGAATAACAACGTATCGCGCATGGTTTTGCGTTCTGCGGATAA 19367 Query 11047 CACCACCATTCCACACACCCCGGCAGAAATGGAACTCGACGCCGATTATCGTCTGCGTAT 11106 | ||| | || | || || || | |||||| |||| ||||| |||| | ||||| Sbjct 19368 TTCGACCGTACCGCCAACTCCTGCCGTTATGGAATCCGACAACGATTTTCGTGTCCGTAT 19427 Query 11107 ACAGCAGGCTTTTGAGGGGCTGAGCGTGGCGGGGTCTGTCGGGTCGTACCAGTATCATGG 11166 | ||||| ||||| || ||||||| || || | || || | || | ||||||| Sbjct 19428 TCCACAGGCATTTGAAGGTTTGAGCGTTGCAGGCCCGGTGGGTGCTTATGAATATCATGC 19487 Query 11167 CCGTAGTGCTGACGGGCGCGTCGGCGATATTTCAGTTATCAGCCCGTCGCCAGCCTGTGT 11226 ||||||||| || || ||||| | ||| || | ||||||||||| || || || Sbjct 19488 CCGTAGTGCGGATGGCCGCGTTGCAGATGCATCGGCAATCAGCCCGTCACCGGCTAACGT 19547 Query 11227 GACGATTTCCGTGTTGTCTCGTGAAAACAACGGCGTCGCATCTGAGGAACTGCTTGCAAT 11286 || | | | |||| |||| | |||| || || ||||| | || ||||| | ||| Sbjct 19548 CACAGTAACTATTATGTCCCGTGCAGACAAAGGAGTGGCATCCAAAGAGCTGCTGGAAAT 19607 Query 11287 TGTGCGCAATGCCCTGAACGCAGAAGATGTCAGGCCGGTCGCTGACCGGGTGACGGTACA 11346 ||| || |||||||| | ||| | || | ||||| ||||| || ||| || || Sbjct 19608 TGTCGAAAAAGCCCTGAATGACGAAAACGTGCGTCCGGTGGCTGATCGTCTGAAAGTCCA 19667 Query 11347 GTCAGCCGAAATTGTTAACTACCAGATTAACGCCACGCTTTATCTTTATCCCGGC-CCGG 11405 |||||| ||||| | || | ||| | || ||| || | | ||||| | |||| Sbjct 19668 GTCAGCGAGCATTGTGGAATATGAAATTGATGCGGTGCTGTA-CATCTTCCCGACGCCGG 19726 Query 11406 AAAGTGAACCCATCAGGGCGGCGGCTGAGGCAAAGCTGAAAGCCTATATCAGCGCGCAGC 11465 || || || ||| | ||| || ||| || |||||| |||| | ||||||| Sbjct 19727 AATCCGAGCCTATCCGCAAGGCAGCAGAGCAGAAACTGAAACACTATGTTGAAGCGCAGC 19786 Query 11466 ACCGCCTCGGGCGCGATATCCGTAAATCAGCGATTTATGCCGCCCTGCATGTTGAGGGTG 11525 | || | || || ||||| ||| ||||| ||||| ||||| |||||||| || |||| Sbjct 19787 ATCGTTTGGGACGTGATATTCGTTTGTCAGCTATTTACGCCGCACTGCATGTGGAAGGTG 19846 Query 11526 TTCAGCGGGTGGAGCTGGCGGCACCGGTCGCGGATATTGTTCTCGATAACACACAGGCGT 11585 | ||||| ||||||||| ||||| | || |||| | ||||| |||||||| | Sbjct 19847 TCCAGCGTGTGGAGCTGAAAGCACCATTGAAAGACGTTGTATTGGATAAAACACAGGCTT 19906 Query 11586 CCTTTTGCACTGACTACAGCCTTGTAATCGGGGGCTCTGATGAATGACTCACGATTGCTG 11645 | | |||||| | || || ||| || || |||||||||||| || | ||| Sbjct 19907 CTTATTGCACCAAAACCACACTGACAATGGGAGGTTCTGATGAATGA---TCGCCTTCTG 19963 Query 11646 CCGGTAGGCTCATCGCCACTGGAGGTTGCCGCCGCAAGGGCATGTGCCGAGATTGAAAGA 11705 ||| | || ||| |||| | || | || || || | || ||||||||| ||| ||| Sbjct 19964 CCGATGGGTTCAACGCCGTTAGAACTGGCTGCGGCGAAAGCCTGTGCCGAG-TTG-CAGA 20021 Query 11706 ACGCCGGTCAACATC------CGCGCGTTGTGGAACCCTGACACCTGTCCGGAAAATTTG 11759 | | |||| ||| || | | ||||||| || ||||||||||||| | || Sbjct 20022 A----GATCAAAATCCCATTGCGGGAGCTGTGGAATCCGGACACCTGTCCGGCATCGTTA 20077 Query 11760 CTGCCGTGGCTGGCGTGGGCGTTTTCTGTCGACCGGTGGGATGAGAACTGGCCGGAGGGA 11819 ||||| | ||||| ||||||| ||||| ||||| ||||| || |||||| | ||| | Sbjct 20078 CTGCCTTATCTGGCATGGGCGTGGTCTGTGGACCGCTGGGACGAAAACTGGTCTGAGAGC 20137 Query 11820 ACAAAACGTGCCGTTATCCGTGATGCATATTTCATTCACTGCCACAAGGGGACTATCGGC 11879 || ||| | | || ||| | | || ||| | || ||||| || || || || Sbjct 20138 ACCAAAAGGGAAGTGATCAAGGGTTCACTGTTCCTGCATAAACACAAAGGAACGATTGGA 20197 Query 11880 GCAATCCGTCGGGTAGTGGAGCCTCTCGGCTATGTCATCAATGTAACGGAATGGTGGGAA 11939 || ||||| || || | ||||| | || ||| ||||| |||| |||||||||| | Sbjct 20198 GCCATCCGACGAGTGATTGAGCCGTTGGGTTATCTCATCCGCGTAAAGGAATGGTGGCAG 20257 Query 11940 AGCAGCGACCCGCCCGGCACATTCCGGCTTGATATCGGGGTGCTTGAAAGTGGCATTACC 11999 | || ||| | || ||||| ||||| || ||||| || || || || || || || ||| Sbjct 20258 ACCAACGATGCCCCAGGCACCTTCCGACTGGATATTGGTGTTCTGGACAGCGGTATCACC 20317 Query 12000 GAGGAAATGTATTTCGAAATGGAACGACTGATTGCGGATGCAAAACCAGCCAGTCGTCAT 12059 | ||||||| ||| ||||| |||||| ||||||||||| | || || ||| Sbjct 20318 CATGAAATGTTCGAAGAACTGGAAAACCTGATTTTCGATGCAAAACCGGTAAGCCGACAT 20377 Query 12060 CTGACTGG 12067 ||| ||| Sbjct 20378 TTGATTGG 20385 Score = 129 bits (142), Expect = 1e-25 Identities = 359/550 (65%), Gaps = 28/550 (5%) Strand=Plus/Plus Query 12964 CTCAGCAATGCCACTGACAGCACGTCTGAGACGCTGGCCGCAACGCCGAAAGCGGTTAAA 13023 || |||| |||| ||||||| || || | || ||||||||||||||||| ||| Sbjct 21082 CTGAGCAGTGCCGTAGACAGCAATAGCGAAACCCACGCAGCAACGCCGAAAGCGGTGAAA 21141 Query 13024 GCGGCTA------TGG---------------ATAATGCGAACGGGCGGCTGGCGAAAAAC 13062 |||||| ||| ||||||| || ||| ||| |||||| Sbjct 21142 GCGGCTTATGATTTGGCTAAAGCAGCGGATAATAATGCTAATACGCGTTTGGAAAAAAAC 21201 Query 13063 AGTAATGGCGGCGATATTCCTGACAAGGATTTGTTTGTACGTCGTATCGGTGCCGCGCGA 13122 | ||||||| ||| | |||| |||||| ||| || ||| ||| | || || Sbjct 21202 AAAAATGGCGCAGATGTAGCTGATAAGGATGCATTTAACCGCAATATTGGTTCGGCCAGA 21261 Query 13123 GCGTTTGATGGCGCGGTGACTATCGGCGGTGATGCTAATCCGTGGACTACGGCGGAGTTT 13182 || ||| ||| || | ||| || |||| || || | ||||| || | |||||| Sbjct 21262 GCTTTTACTGGAGCAATCCATATTGGTGGTGGTGGTACT---TGGACAACTGAAGAGTTT 21318 Query 13183 ATCGCCTGGCTGGAGAGTTGCGGCGCATTCAATCACCCGTACTGGATGTGTAAAGGGGCG 13242 || || ||||| | ||| | || || || ||||| ||||||||||||||||| || Sbjct 21319 ATTGCATGGCTAAAAAGTAAAGATGCTTTTAACCACCCTTACTGGATGTGTAAAGGATCG 21378 Query 13243 TGGGATTATACAGGTAACAAAGTCATCACAGATACAGGGTGCGGT--AATATCTGTCTCG 13300 ||| ||| | | |||| | ||||| ||||| || || ||| ||| || | | | Sbjct 21379 TGGTCATATGCGAGCAACAGAAGAATCACTGATACTGGCTGTGGTGCAAT-TCACT-TAG 21436 Query 13301 CTGGCGCTGTGGTGGAGGTTATGGGGGCTGGCGGTGCGATTACCATTCGGGTGACAACGC 13360 | || ||||| ||||| || |||||| || ||| || || || || || |||||| Sbjct 21437 CGGGTGCTGTTGTGGAAGTCATGGGGCTTGAAAGTGTAATGACGATCCGTGTTACAACGG 21496 Query 13361 CCACCACAACATCAGGTGGTGGAATTGCCAGTGCTCAGTTTACCTATATCAATCACGGCG 13420 | | ||| || || ||| | ||| | | ||||| ||||| ||| || ||||| Sbjct 21497 CTCCTACATCAATAGATGGCTGTATTCCGAACGCTCAATTTACTTATGGAAACCACGGTA 21556 Query 13421 ATGGATATGCTCCGGGATGGCGACGCGATTTCAACACCATAAATAAACCCACTCCCGAAG 13480 | | |||| ||| | ||| || | || | ||||| |||||||| || |||| | Sbjct 21557 AGGATTATGTTCCAAGTTGGAGAAGGGACTATAACACTGCGAATAAACCATCTGCCGATG 21616 Query 13481 ATGTAGGGGC 13490 | || || || Sbjct 21617 AAGTTGGTGC 21626 Score = 118 bits (130), Expect = 2e-22 Identities = 271/407 (67%), Gaps = 6/407 (1%) Strand=Plus/Plus Query 12379 AATTACATTGTGGCCGAGCTGGTTATTCCGCCGGAGGTGGGCGGCTTCTGGATGCGTGAG 12438 ||| | ||| | || || | ||||||||| || | || |||| ||||| ||||| Sbjct 20761 AATCAGATTATCGCAGAACAGGTTATTCCTGAAGACGAAGGTGGCTGGTGGATCCGTGAA 20820 Query 12439 CTTGGCCTTTATGACGATGAAGGGACGCTGATTGCTGTCGCCAATATGGCCGAAAGCTAC 12498 | ||||| | ||| | || || |||||||| || | ||| || |||| |||| Sbjct 20821 ATCGGCCTGTTCGACAAAGACGGCGTTCTGATTGCGGTGGGTAATTGCGCAGAAACCTAC 20880 Query 12499 AAGCCAGAACTGGCTGAGGGCTCGGGGCGTGCACAGACATGCCGCATGGTCATTATTGTC 12558 ||||| || || || ||||| || ||| | |||||| ||||||| || | |||||| Sbjct 20881 AAGCCCCAATTGCAAGAAGGCTCCGGCCGTACCCAGACAATCCGCATGATCCTGATTGTC 20940 Query 12559 AGCAGTGTCGAGTCTGTGGCGCTGTCCATTGACTCAACGATGGTGATGGCGACGCAGGAT 12618 ||||| | | | ||| | ||| |||| || | |||| |||| |||| || Sbjct 20941 AGCAGCGCAAACGCAGTGACACTGAAAGTTGATCCATCTGTGGTTCTGGCAACGCGTGAG 21000 Query 12619 TATGTCGACGACAGGCTCGCCGAACATGAAAAATCCCGTCGTCATCCTGATGCCACTCTT 12678 ||||| || | | || |||| | ||| |||| || ||||| || || || Sbjct 21001 TATGTAGATAATTCTATTACCAAACACGCAAACAGCCGTAACCACCCTGACGCGACACTG 21060 Query 12679 AAAGAAAAAGGGTTT---ACTCAGCTCAGTAACGCGACAGACAGCGAGTCTGAAACGCTC 12735 ||||||||||| ||| | || | |||| || ||||||| | ||||| | | Sbjct 21061 AAAGAAAAAGGATTTGTGATTCTGAGCAGT---GCCGTAGACAGCAATAGCGAAACCCAC 21117 Query 12736 GCAGCGACGCCGAAAGCTGTCAAGACAGCGTATGACCTTGCTAATGC 12782 ||||| ||||||||||| || || | || ||||| | ||||| || Sbjct 21118 GCAGCAACGCCGAAAGCGGTGAAAGCGGCTTATGATTTGGCTAAAGC 21164 >seq2600 Length=29343 Score = 149 bits (164), Expect = 1e-31 Identities = 208/290 (72%), Gaps = 4/290 (1%) Strand=Plus/Minus Query 28012 GATTATGCATGGGAGGAAGACCGCCACGAACTTAAAAGTGATAAGGCTAAAAAAGCCCGC 28071 || |||||| | || ||||| | | ||| | | ||||| | ||||||||||| ||| Sbjct 23760 GAATATGCACGTGAAGAAGATAACGAGGAATTAAGCAGTGAAGAAGCTAAAAAAGCGCGC 23701 Query 28072 TTTCATGCTGAGGCTATCGACCCGGAGAAAGGCAGTGCTACCGGCTATGTCGCGAAATAC 28131 |||||||| | ||||||| |||||||| ||||| || || ||| |||| ||||| Sbjct 23700 TTTCATGCAGTCCCTATCGATAAAGAGAAAGGTAGTGCGACAGGTTATATCGCTAAATAT 23641 Query 28132 ATTTCTAAAAACATCGACGGTTATGCTCTCGATGGTGAAACCGATGACGAAAGCGGT--G 28189 ||||||||||| || || |||||||| || |||| || | || ||| ||| Sbjct 23640 ATTTCTAAAAATATAGATGGTTATGCCCTAGATGAAGATATTGACTTGGAATCTGGTAAA 23581 Query 28190 AGCTGCTGAAAGAGACAGCCCCCGCTGTATCAGCATGGGCGGCGCGCTGGCACATCCGTC 28249 |||||| ||||| | |||| | | || || |||||||| || ||| | || || | Sbjct 23580 AGCTGC--AAAGATATAGCCAAAAATATTTCGGCTTGGGCGGCTCGTTGGAAAATTCGAC 23523 Query 28250 AGTTTCAGTTTATCGGCGGTGCGCCGGTGACGGTCTACCGTGAATTGCGT 28299 | |||||| || ||||||||||| || | |||| |||||||||||| Sbjct 23522 AATTTCAGCAAATAGGCGGTGCGCCTGTAAGCGTCTGGCGTGAATTGCGT 23473 >seq2573 Length=24683 Score = 127 bits (140), Expect = 4e-25 Identities = 261/383 (68%), Gaps = 15/383 (4%) Strand=Plus/Minus Query 9774 CGCAACCTCATCCGCTCAGGTGTGGTGACTGAGGTCGATACCGCGCAGGGGCTGTGCCGC 9833 ||||| || || || |||| || | || | ||||||||||| | || |||| || Sbjct 1191 CGCAATCTGATACGGACAGGCGTTATTACCCAAGTCGATACCGCAAATGGCATGTGTCGG 1132 Query 9834 GTACAAAGCGGCGGG--ATC--CAGACTGCATGGCTGAACTGGCTGACCACCCGCGCCGG 9889 || ||| | || ||| | || | ||||| ||||||||||| || | || || Sbjct 1131 GT----CGCGACAGGCAATCTTGAAACCGACTGGCTATACTGGCTGACCTCCAGAGCAGG 1076 Query 9890 TCGTTCGCGGACATGGTGGGCTCCCTCGGTCGGTGAGCAGGTGCTGCTGCTGGCAATTGG 9949 || || || |||||||| ||| || ||||||||||| | |||| | || || Sbjct 1075 AAACTCCCGCACTTGGTGGGCACCCAGTGTAGGTGAGCAGGTTTTATTGCTTTCCATCGG 1016 Query 9950 TGGCGAGCTTGATACTGCTTTCGTGCTGCCGGGGATTTTCTCCGACGATAACCCTGCCCC 10009 ||| ||||| || || || || |||| | |||||||||| ||||| || || || Sbjct 1015 TGGTGAGCTAACCACCGCCTTTGTATTGCCAGCGATTTTCTCCAACGATTTTCCGGCACC 956 Query 10010 GTCAGCCTCGGCGGATGCGTGGCATGTGGTGTTCCCCGACGGCGCTGTTATGGAGTATGA 10069 ||| | || | || ||| |||| || || || || ||||| || ||||||||||| Sbjct 955 CTCAACATCTCCCGAAGCGACGCATACCGTATTTCCAGATGGCGCAGTGATGGAGTATGA 896 Query 10070 GCCGGAAACCGGTGCGCTGACGGTCAGCGGCATCAAGACTGCCGATGTGACGGCATCGGA 10129 ||| || |||| || ||||||| | || || || || ||| || |||||||| || Sbjct 895 ACCGCAATCCGGCGCATTGACGGTAACAGGTATTAAAACCGCCACAGTAACGGCATCAGA 836 Query 10130 ----GTCC--ATTACCGCCACCG 10146 |||| ||||||| ||||| Sbjct 835 ATCTGTCCATATTACCG-CACCG 814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97910269958464