Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq2664 560 3e-155 seq2629 168 2e-37 seq2774 161 3e-35 seq1458 140 1e-28 seq2599 111 5e-20 seq2270 100 9e-17 >seq2664 Length=5510 Score = 560 bits (620), Expect = 3e-155 Identities = 1239/1827 (68%), Gaps = 56/1827 (3%) Strand=Plus/Minus Query 38671 ACCTGTTGCCAAACGGCAAGAAAGACGGGCATGAGTGGGTTGCCGGTAACGTCAACGGCG 38730 ||||| |||| |||| || | ||||||||||||||||| ||| |||||||| | Sbjct 2328 ACCTGCTGCCGGACGGACGCAAGGCCGGGCATGAGTGGGTTGTCGGATCGGTCAACGGGG 2269 Query 38731 ACAAGGGGAACAGCCTGAAGGTTAACCTTAGT--GGCAAGAAAAAATGGGCTGATTTCGC 38788 | || ||||||||||| |||| || || ||||||||| ||| | || || || Sbjct 2268 AAGCCGGCAACAGCCTGAAAATTAA--TTTGTCCGGCAAGAAAGTCTGGTCCGACTTTGC 2211 Query 38789 TGAGGGAGACGGCGGTGACATGCTTGATTTGTGGATGGCGTGTCGTGGAATTAACCTGCA 38848 ||| || |||||| || || | ||||||||| || | |||| | ||||| Sbjct 2210 TGAAGGCACCGGCGGGGATCTGTTGGATTTGTGGGTGCAGGTGCGTGATTGTGGGCTGCA 2151 Query 38849 TCAGGCCATGCAGGAAGCGAAGGCATTTCTCGGCATCAGGGAGGACGATCACCATTTCGA 38908 |||||||||| ||| || || ||||| || || || ||||||| |||||| | Sbjct 2150 TCAGGCCATGACGGAGGCAAAACAGTTTCTGGGGATTGCCGATGACGATCGCCATTTTGC 2091 Query 38909 CGCCAGAC-GTGAGAAGAGATTCTCCAGACCTGACCG-CA-AG-------AAAATCGTCC 38958 ||||| || | | || | || ||| | || || || || || ||| |||| Sbjct 2090 CGCCAAACAGACAAAAAACTTTGTCCGG-CCAGATCGTCATAGGCTGGCAAAACACGTCT 2032 Query 38959 GCTACGTTACCAGAACAGAATCACATCTTGAGTACCTG-CAATCGCGGGGCATA--TCGC 39015 | | ||| || ||| | | || || ||| | | | ||||| || |||| Sbjct 2031 TCAA----ACCTGACCAGTGTTA-----TGCCTATCTGGCTAGC-CGGGGGATCAGTCGC 1982 Query 39016 CTGAAGTCGCGAAGCGATACGAGGTTGTCAGCGGAAAAGTCTGGAATGGCG-----AAC- 39069 | || || |||||| | ||| ||| | | |||||| | | ||| Sbjct 1981 CAGACCGCG-GAAGCGTTT-GAGATTGGGGATGCCAGTGTCTGGTTTCCTGCTGAAAACA 1924 Query 39070 GAGAACTGAATGCCCTGGTGCTTCCGTACAAACGCGATGGCGAGCTGCTGCAGGTCAAGC 39129 | | | || ||| | | | || |||||||| | || || ||| |||||||||||| Sbjct 1923 GGGTATTGCCGGCCATTGCCTTCCCCTACAAACGGAACGGGGAACTGTTGCAGGTCAAGC 1864 Query 39130 GAATCAGTACTGAACGTCCGGACGGGAAGAAAGTCATCATGGCAGAAGGTGACTGTGAAC 39189 | |||||||| | ||||| | || || ||||| || ||||| |||| ||||||| Sbjct 1863 GCATCAGTACGGTGCGTCCCAAGGGTAAAAAAGTGATGATGGCGGAAGCCCGGTGTGAAC 1804 Query 39190 CTTGCCTGTTCGGGTGGCAAGCTCT--CGAT-GCTGGCGTGAG-GGCGGTTGTGCTTTGC 39245 | |||||||| || ||||| || | ||| |||| | ||| || | || || || Sbjct 1803 CCTGCCTGTTTGGCTGGCAGGCAATACCGAACGCTGTCC-GAGTGGTGATTTTG---TGT 1748 Query 39246 GAAGGCGAAATTGATTGCATGAGCTATGCGCAATACGGGATCCCGGCGCTATCTGTCCCG 39305 ||||| || || || ||| |||| ||| || ||||| | ||||| || ||||| ||| Sbjct 1747 GAAGGGGAGATCGACTGCCTGAGTTATCACCAGTACGGTTTGCCGGCCCTGTCTGTGCCG 1688 Query 39306 TTCGGTGGCGGGAAAGGCGCCAAGCAACAGTGGATTGAGTTCGAATACCACAACCTCGAC 39365 ||||| || || || || ||||| || |||||||||||||| ||||||||||| || || Sbjct 1687 TTCGGGGGTGGTAAGGGGGCCAAACAGCAGTGGATTGAGTTTGAATACCACAATCTGGAT 1628 Query 39366 AGGTTTGAAGAAATATTCATTTCGATGGACGTTGACGATGTCGGGCGTGAAGCAGCAAGG 39425 | ||||| ||||| | ||||| ||||| || || || ||||| || || || | Sbjct 1627 CGCTTTGAGGAAATTTGGATTTCCATGGATAACGATGACGTGGGGCGGGAGGCGGCCAAA 1568 Query 39426 GAAATCGCAAGCCGACTTGGTGAGCATCGCTGTCGTCTGGTTACACTGCCACACAAAGAT 39485 || || || ||||| | || | |||||||| || | || | ||||| |||| ||| Sbjct 1567 GAGATTGCCAGCCGGTTAGGGGCACATCGCTGCCGGTTAGTCAGCCTGCCGTACAAGGAT 1508 Query 39486 ATCAACGAATGCCTGATGAACGGCGTCACTGAGGATGAAATCTGGCAGTACATCGGAACA 39545 ||||| | | || | ||| | || |||||| | || | | | | ||| Sbjct 1507 ATCAATGCCGGTTTGCAGGCGGGCATGACACCGGATGAGGTGGTGCGTTGCCTTGAAACG 1448 Query 39546 GCGTCATATTTCGACCCGGAAGAGCTTTACAGCGCCCGTGAGTTTTATCAGGACACCATC 39605 || | | ||| |||||||||||| | | ||| ||||| ||||||||||||||||| || Sbjct 1447 GCAGCCTTTTTTGACCCGGAAGAGTTGTGCAGTGCCCGCGAGTTTTATCAGGACACGATT 1388 Query 39606 AATGCTTTTTACGGCAAGCAGCAGTATCTGTTTAACCCACCGTGGGAAACGCTGGCTTAC 39665 | || || ||||| || || | ||||||| | |||||||||| | |||| | Sbjct 1387 GAGGCGTTCTACGGTCAGGCCCACTGCCTGTTTACCACACCGTGGGACAGGCTGAATCCG 1328 Query 39666 AACTTCCAGTTCCGTGAGGCGGAGTTAACGCTAGTCAATGGCGTGAACGGTCACGGGAAA 39725 | ||| ||||| || | ||| | ||| | ||||||| || ||||| ||||| ||| Sbjct 1327 CATTTCAGTTTCCGCGAATCAGAGCTGACGGTGCTCAATGGGGTCAACGGGCACGGAAAA 1268 Query 39726 ACGGAGGTTGTCGGGCATATGGCACTTGAGGCCATGAGGCAGGGGGTAAAAACATGCGTC 39785 | ||| | |||||||| || ||| || ||| ||||||| | | || || Sbjct 1267 AGTGAGATGGTCGGGCACCTGCTGTGTGAAGCGATGGGGCAGGGCATCCGGGCCTGTGTG 1208 Query 39786 GCATCGCTTGAACTGAAGCCCGGGGTTTTGCTTAAACGCCTGACCAGGCAGTCAACATGC 39845 || || |||| |||||||| || || || || || |||||| |||| | | ||| Sbjct 1207 GCCTCTTTTGAGCTGAAGCCGGGACAGTTACTGAAGCGGCTGACCCAGCAGGCGGCTTGC 1148 Query 39846 TGCAAAACGCCACCAGTACTGGAAATCGAATCAGCATTTAAGTTTTACGATGACCGGCTC 39905 | ||| ||| || || |||||||| | |||||| ||||||||||||| ||||| Sbjct 1147 TCGGAAAGGCCGCCGGTGGCAGAAATCGAGGCCGCATTTCAGTTTTACGATGATCGGCTG 1088 Query 39906 TGGTTATTTGGCCTGACAGGTACAGCCAAGGCTGAACGCCTGATTGAAATTTTCACATAC 39965 ||| | ||||||||||| || || || || || | || ||||||| || |||| || Sbjct 1087 TGGGTTTTTGGCCTGACGGGAACGGCAAAAGCCGCGCGGGTGATTGAGATCTTCAGCTAT 1028 Query 39966 GC-CAGACGGCGATACGGCATCCAGTTATTCATCATCGACAGCCTCATGAAGTGCGGTAT 40024 || ||| || || ||||| || ||| | || | ||||||||||| ||||| |||||||| Sbjct 1027 GCGCAG-CGTCGTTACGGTATTCAGCTGTTTGTTATCGACAGCCTGATGAAATGCGGTAT 969 Query 40025 TGGCGATGACGATTACAACGGGCAAAAGGCGTTTGTTGATTCGCTGTGCGACTTCAAGAA 40084 || || || |||||||||||||| || || ||||| ||| | ||||| |||||||| || Sbjct 968 CGGGGAGGATGATTACAACGGGCAGAAAGCCTTTGTGGATGCCCTGTGTGACTTCAAAAA 909 Query 40085 TAAAACCAACTCTCACATTATCCTCGTCACTCACTCCAGAAAGGGAGACAGCGAGGAGAA 40144 ||| | || | ||||| || || ||| |||| || ||||| |||||| Sbjct 908 CCGTACCCGCAGCCATGTGATCCTGGTGACCCACAGTCGAAAAGGGGACAGTGAGGAGCG 849 Query 40145 ACCTACCGGAAAGATGGACGTAAAAGGCTCAGGAGCGATTACAGACCTGACGGATAACCT 40204 ||| || || || ||||| || |||||| | || |||||||| |||||||| || || | Sbjct 848 ACCGACGGGGAAAATGGATGTCAAAGGCACCGGGGCGATTACTGACCTGACCGACAATTT 789 Query 40205 GTTTATCATCTGGCGCAATAAAGCTCGCGAGAGAGCGCTAC-AGCGC-GTTCAGGCTGGA 40262 | | || ||||||||||||||||| || ||| | | | | | | || | || | ||| Sbjct 788 GATGATTATCTGGCGCAATAAAGCCCGTGAGCGTGTGTTGCAAAAGCAGGACA--CCGGA 731 Query 40263 GAGCAGATTAAC-GATAAAGACCAGCAGCTTCTTGCTGCACCCGCATCTATTTTAATGCT 40321 | | | ||||| || || || | | | || || | || || | || | || | Sbjct 730 G-CCGGGTTAACGGAAAAGGAACGGGAAAAACTGGCCGATCCGGCGGCCATGGTGTTGAT 672 Query 40322 GGAGAAGCAGCGTAACGGGGAAGGATGGGAAGGTGGCGTACCGCTATTTCTTGATGAGCA 40381 ||||| ||||| ||||| | || ||||| || || | ||| | ||| || | | Sbjct 671 TGAGAAACAGCGGAACGGCAACGGCTGGGAGGGCGGTATCGGGCTGTATCTGGACAAAAA 612 Query 40382 GTCTCACCAGTTCCTGCAAACGGAAGGTGC--ATCCCCATACAACTACATCGCCAATATG 40439 || || ||||| ||| |||| | || ||||| || |||| || ||||||||| Sbjct 611 ATCCCATCAGTTTTTGCCGCAGGAACGGGCTGATCCC--TATCACTATATTGCCAATATG 554 Query 40440 CCGAAATCGGAATATGACGAAGCGTGG 40466 ||| || || |||||||||| |||| Sbjct 553 CCGGCCTCTGAGTATGACGAAGTGTGG 527 >seq2629 Length=15125 Score = 168 bits (186), Expect = 2e-37 Identities = 461/700 (66%), Gaps = 12/700 (2%) Strand=Plus/Minus Query 36195 GCGTCAACAACTACGCCAATGATTTTGCAGTTTCCGTTGATTTCTATCATCGGATATTGT 36254 || || || || ||||| || ||||| ||||| || || || |||||| | || || Sbjct 7417 GCATCTACTACAACGCCTATTATTTTACAGTTCCCATTAATGGGTATCATGCGGTACTGA 7358 Query 36255 GGGTTTAATGGTTTTAAAAACTTTCGGCCTGCATCCATAACTAATTTTTTGAATGTGGCC 36314 || || | ||||||| | | ||| || ||||| | | ||| ||| |||||||| Sbjct 7357 GGATTCAGAGGTTTTAGATATTTTGAACCAGCATCTGTTATGTATTGTTTAAATGTGGCT 7298 Query 36315 TCGTTTTCACCTTCTAATTTTGCAACAACCAGCTTGCCGTTTCTTGGTTCGACTTCGGGA 36374 || || || || ||| || ||||| | ||| || || ||| || | | || Sbjct 7297 TCATTATC------TAGTTTGGCCACAACTAACTTACCATTAACTGGCTCTATATTTGGG 7244 Query 36375 TCAACCAGAATTATCATTCCTTCTGGAATGCTTAACCCTGCCGGTGCTGTCATAGAGTCA 36434 ||||| | || | ||| ||||||||||| || | |||| || | |||||||| ||| Sbjct 7243 TCAACTAATATAACCATCCCTTCTGGAATACTAAGTCCTGAAGGAGACGTCATAGAATCA 7184 Query 36435 CCTTGGACATCAAGCCAAAATGAATCTTCTGAACAATCTACAGTGGTGTCGTGCCAGTTC 36494 || ||||| | |||||| ||||| | ||||| || || || |||| ||||| Sbjct 7183 CCGATCACATCCAACCAAAAAGAATCACCAGAACAGCTGACGGTAGTTTCGTACCAGTCA 7124 Query 36495 TCTATCGCGCGCTTGTGATAAGGTTCTACAGCTTCCATCCATTGCCCTGCGCTTACCCAA 36554 ||||| | | ||||| || || || || ||||| |||| | || ||||| ||||| Sbjct 7123 TCTATAGATAGTTTGTGGTATGGCTCCACGGCTTCGCTCCAATTACCAGCGCTAACCCAG 7064 Query 36555 CTGATAAGAGGGTATGATCCTCTTGGCTCATGCCTACTATGATAGGCAACGTT-TGTCTG 36613 || ||||||||||| ||||||| | ||| || | | | ||| || | | Sbjct 7063 CTTATAAGAGGGTACTCACCTCTTGAGTGATGAAATTTAGAAAATGAAACATTATCACCA 7004 Query 36614 GCTTAA--ATCTCCTTTCAGCAAATAGTCAGGGGAGCACTGAAGAGCCTTCGAAAGTGCC 36671 | | | || ||| ||| | || ||||| | ||| ||||| | | | ||| Sbjct 7003 CCGTCACTATTACCTGTCATAAGGTATTCAGGTGCACACCCAAGAGAACTTGCTAATGCT 6944 Query 36672 AACAGGTTCTCCCCATTTGGCTCAGTCTCCGAGCGCTCCCATTGCGATATTGCAACATTA 36731 | | ||| | |||| ||| || | || |||||||| || || | | | Sbjct 6943 ATTAAGTTTCCTCCATCTGGTGATGTTATCCCGCCTTCCCATTGAGAGATGGATGCGTGT 6884 Query 36732 GACACTCCCACCATCTTACCAAGAGCGGCTTGTCTAATCTTGAGtttttttCTTCGAGCG 36791 || || || || ||||| | || || || ||| | | ||| || | ||||||||| Sbjct 6883 GATACGCCGACTTTCTTAGCCAGCGCAGCCTGTGTGAGCTTAAGCTCTTTTCTTCGCAAT 6824 Query 36792 CGAATACGCTCACCCATCAATTGTGT-ATTCATAGTTAAGTCATCTTAAATAAACTTGAC 36850 ||| || || || || | |||| | |||||||||||||| ||||||||| |||||| Sbjct 6823 TTAATGCGGTCGCCGAT-ATTTGTTTCATTCATAGTTAAGTAATCTTAAATCTTCTTGAC 6765 Query 36851 TAAAGATTCCT-TTAGTAGATAATTTAAGTGTTCTTTAAT 36889 | |||| |||| | || |||||||||| |||| ||| Sbjct 6764 TTAAGAGTCCTAAAAATACATAATTTAAGATGTCTTAAAT 6725 Score = 140 bits (154), Expect = 1e-28 Identities = 122/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 42161 GATAAACTGAAGATTCGAAAACTCGCCTTAAAGCCCCGCAGTTACTGGATTAAACAAGCC 42220 |||||||| || || || | || |||| ||||||||||| |||||||||||||| Sbjct 152 GATAAACTCAAAGCCCGCAAGTTAGCAGTAAAACCCCGCAGTTATTGGATTAAACAAGCA 93 Query 42221 CAACAAGCCGTAAACGCCTTCATCAGAGAAAGAGACCGCGACTTACCATGTATCTCGTGC 42280 ||||||||||| ||||| | ||||||||||||||||| || || ||||| || || ||| Sbjct 92 CAACAAGCCGTCAACGCATATATCAGAGAAAGAGACCGTGATTTGCCATGCATATCATGC 33 Query 42281 GGAACGCTCACGTCTGCTCAGTGGGATGCCGG 42312 |||||| | ||||||||||||||||| || Sbjct 32 GGAACGTTTCAATCTGCTCAGTGGGATGCTGG 1 Score = 123 bits (136), Expect = 7e-24 Identities = 258/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 32897 TTGCCACCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGA 32956 || ||||| ||||||||||| | || | | || | ||||| || ||| | || Sbjct 12597 TTACCACCTAGCATTTGCATTGACCCGCCGATATTTACTACCACTTCCGTTGTGTATCGG 12538 Query 32957 TTCTGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCA 33016 | || || |||||||| |||||||| | || ||| |||||| | || |||| Sbjct 12537 TCTTGACCGCTTTGGTCTTGCCATTTACGCGTTTGCAGAGAGCCTTCGATGTATACCTGG 12478 Query 33017 GAGCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGG 33076 |||||| |||||| |||| |||| ||| || | || ||| || ||||| || Sbjct 12477 CTTCCTTTTTTCAGATATTCGCCTGCAACTTCAGCTAACTTGCCGAAAATTACCACTCGA 12418 Query 33077 TGCCACTCCGTCTGCTC---CTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGAC 33133 ||||| || || | ||| | || || || | | ||| || ||||| ||| || Sbjct 12417 TGCCATTCGGTTTTCTCGCGCATT---TCACCCGATTGTTTGTCACGCCACGATTCCGAT 12361 Query 33134 GTAGCTATTGTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCT 33193 || |||| ||| || || || | ||| |||| ||| ||||| || ||| |||||| Sbjct 12360 GTGGCTAGTGTGAGATTTGCTACTGCTCCCCCTGCTGGCATGTATCGAATTTCAGGGTCT 12301 Query 33194 TGTCCAACCCGACAAAGGATAATCACCTTATTTACGCCTCTGCTTGCCATTTATGCCACC 33253 || || | ||| | || || ||||| ||||||||| | || |||||||| || || Sbjct 12300 TGGCCTAAGTGACCTATGAGGATTACCTTGTTTACGCCTTTACTAGCCATTTACGCTGCC 12241 Query 33254 TGTTTAAGCTCATTTATTCTGAT 33276 | |||||| || || || ||||| Sbjct 12240 TCTTTAAGTTCTTTAATCCTGAT 12218 >seq2774 Length=20939 Score = 161 bits (178), Expect = 3e-35 Identities = 226/311 (73%), Gaps = 11/311 (4%) Strand=Plus/Minus Query 10 CTGACAATAAAGCAAGAGGCTTTCTGTCAGGCATACATCGA-AACG--GGTAATGCTTCT 66 |||||| |||||||||| |||||||||||||||||||| || ||| ||||||||||| Sbjct 16840 CTGACACTAAAGCAAGAAGCTTTCTGTCAGGCATACATAGAGAACAAAGGTAATGCTTCG 16781 Query 67 GAGGCTTATCGGACGGCGTATGCTGCTGACAAGATGAAGCCGGAGGTAGTACATGTTCAA 126 ||||| || || || |||||||| |||| |||||||||| || | | |||||| | Sbjct 16780 GAGGCATACCGAACTGCGTATGCCGCTGGAAAGATGAAGCTAGAATCAATCCATGTTAAT 16721 Query 127 GCATGTAAGTTGCAGGATAACCCTAAGATAGCCCTAAGGATAAAAGA-ATTGAGGGGCGA 185 ||| |||| || | || || ||||| | || |||||||| || || | || | Sbjct 16720 GCAAGTAAATTACTGGCAGACGCTAAGGTTGCACTAAGGATTTCGGAGCTTCA---GCAA 16664 Query 186 GATTA---AGCAACGCCATAACGTCACCGTCGATTCTCTCCTCGCTGAACTGGAAGAGGC 242 || | | ||| | || || ||||||| | | | | || || ||||| || || Sbjct 16663 GAGCACCGAACAAAG-CACGACATCACCGTGGCTGATTTACTTAAAGAGCTGGACGAAGC 16605 Query 243 CAGACAAAAAGCCTTAAGCGCCGAGACGCCACAATCATCTGCAGCTGTAGCGGCGACAAT 302 ||||| ||| |||| |||||| || || ||| |||| ||||| ||||| || || || Sbjct 16604 AAGACAGGCAGCATTAACCGCCGAAACCCCGCAAGCATCCGCAGCCGTAGCCGCTACGAT 16545 Query 303 GGGTAAGGCTA 313 ||||||||||| Sbjct 16544 GGGTAAGGCTA 16534 >seq1458 Length=11418 Score = 140 bits (154), Expect = 1e-28 Identities = 215/307 (70%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 32938 GACTTCGGTAGTGAACCGATTCTGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTT 32997 |||||| || ||| | |||| ||| ||||| || ||||||||||| | ||| |||| Sbjct 11160 GACTTCAGTCGTGTAACGATCCTGACCACTCTGATCCTGCCATTTACGGGTCTGCAAAGC 11101 Query 32998 GCCTTCAAGATAAACCTCAGAGCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTT 33057 ||||| | ||| |||| ||||||||| ||||| ||||| | || | |||||||||||| Sbjct 11100 ACCTTCGATATAGACCTGAGAGCCTTTACGCAGGTACTCACCAGCGACTTCTGCCAGTTT 11041 Query 33058 CCCGCTCATCACCACACGGTGCCACTCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATC 33117 ||| ||| ||||| |||||||| || || | ||| | ||| || || | ||||| Sbjct 11040 ACCGAACATGACCACTCGGTGCCATTCGGTTTTCTCTCTCATCTCACCGGTTTGCTTATC 10981 Query 33118 TCGCCATTGTTCTGACGTAGCTATTGTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTA 33177 ||||| || ||||| || | || | ||| || | ||| || || || Sbjct 10980 ACGCCAGCTCTCGGACGTGGCCAGAGTAATGTTGGCAACTGCTCCACCATTCGGCATATA 10921 Query 33178 TCTAACTTCCGGGTCTTGTCCAACCCGACAAAGGATAATCACCTTATTTACGCCTCTGCT 33237 | ||||||||| || || || | || | | ||| || || |||||||||||||| Sbjct 10920 GCGAACTTCCGGATCCTGCCCCAAATTACCCACTAAAATAACTTTGTTTACGCCTCTGCT 10861 Query 33238 TGCCATT 33244 |||||| Sbjct 10860 GGCCATT 10854 >seq2599 Length=15424 Score = 111 bits (122), Expect = 5e-20 Identities = 196/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 32968 TTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCG 33027 |||||| ||||| || | ||| |||||| || |||| ||||| || |||||| | Sbjct 83 TTGGTCTTGCCACTTGCGTGTTTGCAATTGACCCTCAATATAAATCTGGCTGCCTTTCCT 142 Query 33028 CAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCACTCCGT 33087 |||||| || | ||||| |||||||||||| ||| || |||||||||||||| || || Sbjct 143 CAGATATTCACCGGCAACTTCTGCCAGTTTTCCGAACAGAACCACACGGTGCCATTCTGT 202 Query 33088 CTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTATTGTCAG 33147 | ||| | |||| || | | || ||| |||| ||| || ||||| | ||| | Sbjct 203 TTTTTCCCTCAGCTCACCTGATTGCTTGTCTTTCCATGCTTCAGAGGTAGCCAGTGTGAT 262 Query 33148 GTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCTTGTCCAACCCGACA 33207 || | || || || |||||||| | |||||||||||||| || | ||| Sbjct 263 ATTGGTGACTGCGCCACCATTGGGTGAGTAACGTACTTCCGGGTCTTGACCTAAGTGACC 322 Query 33208 AAGGATAAT-CACCTTATTTACGCCTCTGCTTGCCATTTATGC 33249 | | ||| || | | || ||||| | |||||||||||| Sbjct 323 GACCAGAATACATC-TGTTAACGCCGCGTTGTGCCATTTATGC 364 >seq2270 Length=26257 Score = 100 bits (110), Expect = 9e-17 Identities = 246/371 (66%), Gaps = 4/371 (1%) Strand=Plus/Minus Query 20642 TATCTTGAGGCCCATCTGATTGATGCTCCGAATATCAAGCCGTTTGATATTCGAGTTCGC 20701 ||| | || ||||| |||||| || || || | |||||||| | ||| | || | Sbjct 5465 TATTTGGAAGCCCACACGATTGAAGCACCAAAGAAAAAGCCGTTCCAAATTAGGGTGTCC 5406 Query 20702 CGCATTACACCCGACAGCAGCAGCGATTTGCTGTCCAACGGTACTATCTGGAATAGTTAC 20761 ||| | || |||||||| ||||| |||| |||||| || ||||| |||||| Sbjct 5405 CGCTTAACCGACGACAGCAAAAGCGACCGGCTGCGCAACGGCACAGTCTGGGCCAGTTAC 5346 Query 20762 AGTGAAATCACCGACGACAACCTTAGCTATCCGTTCTCCGCTATTGCGGG--TGCAGTTA 20819 | |||||||||||| | | ||||| || | || |||||||| ||| | Sbjct 5345 ACTGAAATCACCGATACCCTGATGAGCTACCCCAACAGTGCCATTGCGGGGATGC--GCA 5288 Query 20820 TTGACCGTGACCAGTACACCGACACCCCTAGTCGCACATACCATCTTCGCGGCCTGATTG 20879 |||||||| || || |||| ||||| | ||| | || || || ||| |||||| Sbjct 5287 TTGACCGTTCCCTGTTTGCCGATACCCCCAAGCGCTCCTATCACATTAAGGGCATGATTG 5228 Query 20880 TGGACGTTCCTGACAACTACGATCCGATTGCCAGAACTTACTCAGGGCTATGGACTGGCG 20939 || | || || ||||| |||||||| || | || |||| | ||||| || Sbjct 5227 TGCAGGTGCCGGACAATTACGATCCAGCAACCCGTGACTATAAAGGGGTCTGGACAGGGC 5168 Query 20940 GATTCAAAAAAGCGTGGACTAACAACCCGGCGTGGCTGTTCCGTGAACTGGCGAGGAATA 20999 | || ||| || | || || |||||||||||| | ||| || ||| || ||| Sbjct 5167 GTTTTAAACCGGCCTACACCAATAACCCGGCGTGGATATTCTACGATTTGGTGACCCATA 5108 Query 21000 CCCGTTTTGGC 21010 |||||| |||| Sbjct 5107 CCCGTTATGGC 5097 Score = 96.9 bits (106), Expect = 1e-15 Identities = 195/283 (69%), Gaps = 10/283 (4%) Strand=Plus/Minus Query 13581 ACTGGTTGACGTTACTGAGCGGGTATTCAATATTACGCAGCAAACTCGCG-GC-AGCCTG 13638 ||||| || || || ||||| |||||||||||| | ||| ||||| || || | ||| Sbjct 11256 ACTGGCGGAAGTGACCGAGCGTGTATTCAATATTGCCCAG--AACTCCCGTGCGAATCTG 11199 Query 13639 GACGCAACAGCTTCTTTGTATGCCAGACTGGAGCGAGCAACCAGGGAATATGGAACCAGC 13698 || || || ||| | ||||||| | || || |||| || | ||||| | Sbjct 11198 GATGCTACGGCTGCGTTGTATGGTCGCCTTGAAAGAGCCACGCGCAGTTATGGGATGTCG 11139 Query 13699 GCTGATGATCTGGCTAAGCTGAC---AACCATCATTAACCAGGGCTTTGTGGTCTCCGGT 13755 |||||||| |||| || | || |||| | || ||| || |||||||| || Sbjct 11138 GCTGATGAGGTGGCGAAATTAACCGAAACCGTGGCAAA--AGGTCTG-GTGGTCTCAGGC 11082 Query 13756 GCGACCGCTCAAGAAGCAGAAAACGCTATTATCCAGTTGTCTCAGGGACTGGCATCTGGC 13815 || || || |||| || || || ||| || ||||| || |||| |||| || || Sbjct 11081 GCAACGGCGGCAGAATCATCAAGCGTTATGATTCAGTTCTCGCAGGCGATGGCTTCGGGT 11022 Query 13816 GCGCTGCGCGGTGAAGAATTTAACTCAGTGAATGAGCAGGGCA 13858 | |||||||||||||||||||||||| || |||| | |||| Sbjct 11021 GTGCTGCGCGGTGAAGAATTTAACTCCATGTCTGAGAACGGCA 10979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149953299914816