Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq2270 120 1e-22 >seq2270 Length=26257 Score = 120 bits (132), Expect = 1e-22 Identities = 246/363 (68%), Gaps = 2/363 (1%) Strand=Plus/Minus Query 1253 CTGTATGAAGGCACTCGCGGCCCCGGCAAGACGGATGCGCAATTGATGAAGTTCCGGCGC 1312 ||||||||||| || || ||||||||||| || | || ||| | || || ||| Sbjct 23489 CTGTATGAAGGTACACGAGGCCCCGGCAAAACAGCCGCACAACTAGCCCGCTTTCGACGC 23430 Query 1313 TATGTCGGCCTCGGCTATGGCCGGTTCTGGCGCGGGATCATTTTCGACCGTGAATACAAA 1372 |||||||| | || || || |||||||| || | |||||||| |||||||||| Sbjct 23429 AATGTCGGCGTGGGATACGGTTCATTCTGGCGTGGTGTTATTTTCGATACTGAATACAAA 23370 Query 1373 AATCTCGATGACTTGGTATCCAAGAGCCAGCGTTGGTTTCCGCTATTCGAGGATGGCGCG 1432 || || | ||| | || | | | ||||| || || |||| ||||||| || Sbjct 23369 AACCTTGCGGACATCATAACTCAATCCAAGCGTATGTATCGCTTATTTAAGGATGGTACG 23310 Query 1433 AAGTTCAAGGCATCGAAGTCCGATTATCGCTGGGTCTGGCCTACCGGCGAAGAACTCCT- 1491 || ||| ||| || || | || ||||| ||||| || || ||||| | | Sbjct 23309 CGTTTTTTGGCGTCGGCATCTGAATTACGTTGGGTATGGCCAACGGGTGAAGAGTTGTTA 23250 Query 1492 GTTCCGTCAGATCAAGAAGTCGACCGACTACTGGAACTATCACGGTCAGGAATTCCCGTT 1551 ||| || | | |||| | || ||||||||| |||| ||||| ||||||||||| || Sbjct 23249 TTTCGGTTTGGTAAAGAGGCTGA-TGACTACTGGGACTACCACGGGCAGGAATTCCCTTT 23191 Query 1552 CATTGGCTGGAACGAATTGTCGAAATACCCGACGCCCGACCTCTATGAGTCGATGATGTC 1611 || |||| |||||||| | ||| | | | || || ||||||| ||||| | || Sbjct 23190 TATCGGCTTTAACGAATTAACCAAACAGAAGTCTCCTGATTTCTATGAAGCGATGTTTTC 23131 Query 1612 GTG 1614 ||| Sbjct 23130 GTG 23128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167597499815168