Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq2685 107 3e-18 seq2492 104 3e-17 >seq2685 Length=29636 Score = 107 bits (118), Expect = 3e-18 Identities = 194/279 (70%), Gaps = 10/279 (4%) Strand=Plus/Minus Query 164077 ATTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAG 164136 ||||||||||||| ||||| ||||||| || | ||||| || || || | ||| | Sbjct 25658 ATTATTTTACTGCGTCTTTCAGTGCTTTACCGGCAGTAAATGCAGGAACGTTAGCTGCTG 25599 Query 164137 CAATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAG 164196 |||||| |||||||| ||||||||| |||||||| || |||| | ||||||| | Sbjct 25598 CAATTTTAATTTCTTTACCAGTTTGAGGGTTACGACCAGTACGCTCTGCACGGTGATTCA 25539 Query 164197 TTTCGAATGTACCAAAGCCGATTAACTGTACTTTGTTACCTTCTGCTAAAGC----GTTT 164252 | ||||||||| || || | ||||||||| | |||||| | ||| ||| Sbjct 25538 CCTTGAATGTACCGAAACCAACTAACTGTACAGAATCGCCTTCTTTCAGAGCACCTGTTA 25479 Query 164253 GTGATACCGCCAAATACTGCGTCTACAGCTTTTGTAGCATCCTTTTTAGAGATTTCTGCT 164312 ||| | || ||| || | |||||||| || | |||| | | || ||| Sbjct 25478 CTGA-ATCGATAAACGCTTCAATAGCAGCTTTT---GCTTGAGTTTTTGTCAGATCCGCT 25423 Query 164313 GTTTCAGCTACGTGGTT-GATTAATTCAGTTTTGTTCAT 164350 ||||||| || || || | ||||||||| ||||||||| Sbjct 25422 TTTTCAGCAAC-TGATTCGGTTAATTCAGCTTTGTTCAT 25385 >seq2492 Length=11201 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 164077 ATTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAG 164136 ||||||| ||||| ||||| ||||||||||| ||| || ||||| |||| || | Sbjct 7188 ATTATTTGACTGCGTCTTTCAGAGCTTTACCAGCTGAGAAAGCAGGTACATTTGCAGCTG 7129 Query 164137 CAATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAG 164196 |||||| ||||||| |||||| ||||||||||| || |||| | ||||| | | Sbjct 7128 CAATTTTGATTTCTTTACCAGTCTGTGGGTTACGACCAGTACGCTCTGCACGATGGTTAA 7069 Query 164197 TTTCGAATGTACCAAAGCCGATTAACTGTACT 164228 || ||| ||||||||||| | ||||| ||| Sbjct 7068 CTTTGAAAGTACCAAAGCCAACCAACTGCACT 7037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700480521899520