Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1889 82.4 9e-11 >seq1889 Length=309471 Score = 82.4 bits (90), Expect = 9e-11 Identities = 167/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 || || || || ||| |||| ||||| ||||||| | ||| | | |||| ||| Sbjct 15279 CCGATGCCTCCGGCCGACTTGGAGATCAAGGCGCACTGCCAGAGGGTCTTGAAGATGCCG 15338 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 115189 ||||| |||||| | | ||| || |||||||||| ||| || ||| | || Sbjct 15339 TCGATGGAGTCATCGTGCATTGTGAGAAGGAAGCAGGAACTCATCTGGGGCTTGCAGGTT 15398 Query 115190 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 115249 || |||||||||||||| || | |||||| ||||| | | ||||| | |||| Sbjct 15399 CCGGCGTTGAAGAGGGTGGGCGATGCGTGGGTGAACCAGCGATCCGACATGAGGTTGTAG 15458 Query 115250 GTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 115309 || || | | | ||| ||||| ||| ||| | || | | || ||||||| |||| Sbjct 15459 GTTTCGATGGCAGCGTCGATGTCCTCCTTGTGGACTCCCACGGCCACACGCATAAGCATG 15518 Query 115310 TATTGGGG 115317 | |||||| Sbjct 15519 TGTTGGGG 15526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597332214741120