Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_011142.1 Length=47453 Score E Sequences producing significant alignments: (Bits) Value seq2629 86.0 2e-12 >seq2629 Length=15125 Score = 86.0 bits (94), Expect = 2e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 42748 TTGTTCTGCTTCCCAGTCGTCAAGAGGTTTTCGAATTTCATCCTTTAGCGCATCCAGAAA 42807 ||| || || ||||| ||| ||| |||| ||||| || ||| | | ||| | | Sbjct 9599 TTGCTCAGCCTCCCATTCGGTAAGTGGTTGTCGAACTTTATCGCGCAATGTATCGAAACG 9540 Query 42808 CTCACGCATTTGCTTG-CGGCTGGCGTCTACCTTCTTTGGTAGCTCTTTCATATCCGCCA 42866 ||| |||| | | | || ||||||| | |||||||| ||||| | || || | Sbjct 9539 CTCTCGCACA-GTTCGTCGATTGGCGTCGATTAGCTTTGGTATTTCTTTTAACTCTGCTA 9481 Query 42867 CCAGCTCTTTTCCCAGGCCATCAAGGTAAGTTTTTGACTGAGCCACGCGGTAGGCAACAG 42926 | | ||||| || || |||||||||||||||||||| ||||| || |||||| | | Sbjct 9480 CTAAGTCTTTACCGAGCCCATCAAGGTAAGTTTTTGATTGAGCGACTTTGTAGGCCAATG 9421 Query 42927 AGGCAATTTCTTTTCGGCCCTTGGCGGTATTTACATCAG 42965 | |||||||| || || || || | || | ||||||| Sbjct 9420 AAGCAATTTCCTTGCGACCTTTAACAGTGGTGACATCAG 9382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151722839730720