Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1889 89.7 6e-13 >seq1889 Length=309471 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/200 (71%), Gaps = 8/200 (4%) Strand=Plus/Plus Query 107115 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA---CATCTGCG 107171 |||| |||| ||| ||||| || | | | || ||||||||| ||| |||||| | Sbjct 15331 AGATGCCGTCGATGGAGTCATCGTGCATTGTGAGAAGGAAGCA---GGAACTCATCTGGG 15387 Query 107172 GTCTTGGTG-TACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 | |||| | | || || ||||||||||| || | |||||| ||||| | | ||| Sbjct 15388 G-CTTGCAGGTTCCGGCGTTGAAGAGGGTGGGCGATGCGTGGGTGAACCAGCGATCCGAC 15446 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 || || ||| || || | | ||| || ||||| ||| ||||| || | ||||||| Sbjct 15447 ATGAGGTTGTAGGTTTCGATGGCAGCGTCGATGTCCTCCTTGTGGACTCCCACGGCCACA 15506 Query 107291 CGCATAAACATGTATTGGGG 107310 ||||||| ||||| |||||| Sbjct 15507 CGCATAAGCATGTGTTGGGG 15526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589959678687360