Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq2606 113 1e-20 >seq2606 Length=3143 Score = 113 bits (124), Expect = 1e-20 Identities = 243/366 (66%), Gaps = 12/366 (3%) Strand=Plus/Minus Query 14302 CGGAACCACGCGTTGATGTTCTCGATGATGTcgcgcgcgcgcgACGGGTTGAGCGGGCCG 14361 |||||| || |||||| ||||| |||||||| | |||| ||| | ||||| | Sbjct 1188 CGGAACTTAGCATTGATGCCTTCGATAATGTCGCGTACCAGCGATGGGGTCAGCGGTTTG 1129 Query 14362 TCGACGACGCCCATCTGTTCCTCGGCGATCGTGTCAGCGATCACCTGTGCCGAACGCGTG 14421 |||| | | ||| || | || || || |||||||| | ||||| || | ||| ||| Sbjct 1128 TCGATTGCCCACATATGCGCGTCAGCCATGGTGTCAGCCAGTACCTGAGCGGTACGGGTG 1069 Query 14422 TAGTTCTCGAAGAAGAACTTGCCGTCCGCGT------------CGCACGTGCGCGAGCCC 14469 ||| | ||||| |||| |||| | |||| ||||| || ||| Sbjct 1068 TAGCTTTCGAATGGGAACAGTGAGTCCTCAGAAGCAGAGCCAGCGCAAGTGCGTGAACCC 1009 Query 14470 CAGAAACGGAAGCCGTTTCGGTTGACGAGCGTGGTGACCTGGTTCTCGTTCAGATAGCCG 14529 |||||||| || |||||| | || || || |||| || |||| |||||| | Sbjct 1008 CAGAAACGAAAACCGTTTTTGCGGATCAGTGTTGTGATGTGATTCTGGTTCAGCAGATCA 949 Query 14530 GCGTCCGTTGCCGGGTCTTGCAAATCCCACGACACGTCCGCGCTGATGCCGGTCACGCCG 14589 || || ||| | | |||||| |||||| | || || || | || || |||||| Sbjct 948 GCCTCAGTTCCAGTCGCTTGCAGATCCCAGAAGACATCAGCAGATAGACCCGTTACGCCG 889 Query 14590 TTGACGACGACGTTCGACAGCGTCTTGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGC 14649 || || | || || || || || |||||||||||| | || | |||||| || || ||| Sbjct 888 TTAACACCCACATTGGATAGGGTTTTGTGCCAGCCGGTTTCTTCGTCGATTTTGGCACGC 829 Query 14650 AGGCCC 14655 | |||| Sbjct 828 AAGCCC 823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129649990453856