Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq2774 138 3e-28 seq2814 86.0 2e-12 >seq2774 Length=20939 Score = 138 bits (152), Expect = 3e-28 Identities = 205/284 (72%), Gaps = 14/284 (5%) Strand=Plus/Minus Query 1474 TATGGCAGGGCTAACCCCAAAACAGGAGGCTTTCTGTCAGGCATACATAGA-AACG--GG 1530 ||||||| || || | ||| || || ||||||||||||||||||||||| ||| || Sbjct 16847 TATGGCA---CTGACACTAAAGCAAGAAGCTTTCTGTCAGGCATACATAGAGAACAAAGG 16791 Query 1531 CAACGCTTCGGAGGCGTACCGCTTATCGTATGCCGCAGACAAGATGAAGCCAGAAGCAAT 1590 || ||||||||||| ||||| |||||||||| | |||||||||| |||| |||| Sbjct 16790 TAATGCTTCGGAGGCATACCGAACTGCGTATGCCGCTGGAAAGATGAAGCTAGAATCAAT 16731 Query 1591 ACACGTTAACGCCAGCAAGCTACTTGATAACGCTAAGGTCGCGCTAAGGGTTTCTGAATT 1650 || ||||| || || || |||| | |||||||||| || |||||| |||| || | Sbjct 16730 CCATGTTAATGCAAGTAAATTACTGGCAGACGCTAAGGTTGCACTAAGGATTTCGGAGCT 16671 Query 1651 GCAGGGCGA-AATTAAGCAACGTCACAATGTCACCGT---TGATTCGCTCCTCATGGAGC 1706 ||| || | | ||| | ||| | ||||||| ||||| | || | |||| Sbjct 16670 TCAGCAAGAGCACCGAACAAAG-CACGACATCACCGTGGCTGATT---TACTTAAAGAGC 16615 Query 1707 TGGAAGAAGCCAGGCAAAAGGCATTAACAGCAGAGACCCCACAA 1750 |||| ||||| || || |||||||| || || ||||| ||| Sbjct 16614 TGGACGAAGCAAGACAGGCAGCATTAACCGCCGAAACCCCGCAA 16571 >seq2814 Length=35408 Score = 86.0 bits (94), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 29546 CTCATCTGGGCTATACACGCCCAAAATGACGTCAGGGCAATACAGCCGCGCCCAATATTT 29605 |||||| || |||| | || ||||| || ||||| |||||||| || ||||||||||| Sbjct 29070 CTCATCAGGTGTATAGATACCTAAAATAACCTCAGGACAATACAGTCGAGCCCAATATTT 29011 Query 29606 CACGGCCAGATAGGCCAGCTGCTGCTTTGGTGCGGTCTTCCATAGTGGTGAGTTGCGAGT 29665 || || || || |||| ||||| || || || ||| || |||||||| || || Sbjct 29010 AACTGCAAGGTACGCCATTTGCTGTTTGGGATTTGTAACCCAAAGAGGTGAGTTACGGGT 28951 Query 29666 GGCAACGAACTCCAT--GTAAAGTGGTTCGCCCCATGTGATTTCCGTCTCGCTGCGCAAC 29723 ||| ||| || ||||| | || |||||||| ||||| | || | || || Sbjct 28950 TACAA--TACTGGATAAGTAAATTTTCTCACCCCATGTAATTTCATTTTCACCACGTAAA 28893 Query 29724 ACGGCACCGACACGCACGCACAAGCCTT 29751 | ||||| ||||| | || || |||| Sbjct 28892 ATCGCACCAACACGGATCCATAACCCTT 28865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151166058667488