Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_015456.1 Length=50661 Score E Sequences producing significant alignments: (Bits) Value seq2766 80.6 9e-11 >seq2766 Length=35022 Score = 80.6 bits (88), Expect = 9e-11 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 21504 ATTAGCGCAGGGCAATATAGGCAGGCAATGCGAATGCTTCCTGCGCAGATCACAGACGTC 21563 ||||| | || || ||| |||| ||||||||| | | || ||| || || ||| | Sbjct 12387 ATTAGTTCTGGCCAGTATCGGCAAGCAATGCGACAGTTGCCAATGCAAATGACCGACATT 12328 Query 21564 GTAACGTCTCTTGCTTCTGGTATGCCTGTATGGATGGTTGCTATCCAGCAGGGAGGGCAG 21623 || || ||| | |||||||| ||||| ||| | || || | |||||||||||||| Sbjct 12327 GTCACTTCTTTGGCTTCTGGCATGCCGCCGTGGTTAGTCGCAGTTCAGCAGGGAGGGCAA 12268 Query 21624 ATTAAGGATTCTTTCGGCGGGATCGGCAA 21652 ||||| || ||||| || ||| | || || Sbjct 12267 ATTAAAGACTCTTTTGGTGGGTTTGGGAA 12239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161988090597664