Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2252 91.5 1e-12 >seq2252 Length=1130325 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || ||||| || ||||| || ||| |||||| || ||||| || | || || ||| Sbjct 562712 AGGCGGAGAACCAGATGGAGCGTAGATTCTTTCTGGATGTTGTAGTCGGACAGGGTCCTT 562771 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || || || |||||||| || || | | |||||||| || || ||||| ||| Sbjct 562772 CCATCCTCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGGGGGATTCCCTCT 562831 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 ||||||||||| ||| || || ||||| || || | | ||| ||||| Sbjct 562832 TTATCTTGAATCTTTGCCTTGACGTTTTCAATGGTGTCCGAACCCTCAACTTCAAGAGTG 562891 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || | ||| || |||||||||||||| Sbjct 562892 ATGGTCTTTCCGGTCAAAGTCTTCACGAAAATTTGCAT 562929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029144538763360