Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq2442 87.8 3e-12 seq2600 84.2 4e-11 >seq2442 Length=9075 Score = 87.8 bits (96), Expect = 3e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 16128 CCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTATCCA-CTGAG 16186 ||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| Sbjct 9075 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 9016 Query 16187 CTAAGAGCGC 16196 ||||| |||| Sbjct 9015 CTAAGGGCGC 9006 >seq2600 Length=29343 Score = 84.2 bits (92), Expect = 4e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 16034 AAATTATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCT 16093 ||||| |||||||||| | ||||||||| | |||||| |||||||||||| ||||| Sbjct 82 AAATT-TGGTGGCCCCTACTGGACTTGAACCAGTGACCAATCGATTATGAGTCGACTGCT 24 Query 16094 CTAACCGTCTGAGCTACGGGGCC 16116 |||||| |||||||| |||||| Sbjct 23 CTAACCAACTGAGCTAAGGGGCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911061782820480