Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq2814 522 7e-144 seq2442 80.6 7e-11 >seq2814 Length=35408 Score = 522 bits (578), Expect = 7e-144 Identities = 1532/2355 (65%), Gaps = 46/2355 (2%) Strand=Plus/Minus Query 8302 GGATGATTAATGGCTTCTGTTATCGAGATCTGCAACCGCGCGCTGAGCAATATCGGCAAC 8361 || ||| ||||||| || | || || ||||| ||| ||||| ||| ||| || || Sbjct 12961 GGGTGAATAATGGCCTCAGAAATTGAAATCTGTAACTTAGCGCTTAGCCGTATTGGTAAT 12902 Query 8362 AGTCGCAGCATTAACAGCCTGAATGAAGCCAGCAAAGAGGCCGGGCAATGCTCCCTGCAT 8421 || || |||||||||||| | ||| |||||||| || | ||||||| | || Sbjct 12901 AGCCGATTCATTAACAGCCTTAGCGAAAAGAGCAAAGAAGCGGAGCAATGCAATTTACAC 12842 Query 8422 TTTGATGCGTGTCGCGATGCTGCTCTGGCTGACTTCGACTGGAACTTTGCTACCAAGCGC 8481 || || || |||||| || | || |||| || ||||||||||| | |||||| Sbjct 12841 TTCAATCATTGCCGCGATACTACGCTATCTGATTTTCCGTGGAACTTTGCCAGTAAGCGC 12782 Query 8482 GTGGCGCTGGCTGATACCAATAATCCCCCTCCGGACTGGCAGTACGCTTACCAGTACCCA 8541 || || ||||||||||||| || || || || |||||| ||| || ||| |||||| Sbjct 12781 GTTGCTTTGGCTGATACCAACAACCCACCGCCAGACTGGAAGTTTGCCTACAGCTACCCA 12722 Query 8542 TCTGATTGCGTCCGTATAACCGAGATCATGCCTACCGGC-ATACGTAATCCTACCGCTGC 8600 | || || | || | || || | | ||| | | || |||| | || | Sbjct 12721 ACCGACTGTTTAAAGGCAATAGCCATTATTCAATCTGGCCAGAAATA-TCCT-CAGCCAC 12664 Query 8601 TCAGCGCATTGAATATGTTG-TCGGTTCCAATGAAGACCTGACAGGTAAGCTCATTTACA 8659 | ||| | ||| | ||| | ||||| ||| ||| ||||| || || |||||| Sbjct 12663 ATAATGCAATTAATTTCTTGGTGGGTTCGGATGCTGACGGTACAGGAAAACTGATTTACT 12604 Query 8660 CCGATCATCCTGAGGCATGGTTGAAGTATGTGGCGCGGGTTACTGACGTCAATATGTATG 8719 ||| || || | |||||| | | || ||| || || || || ||||| | || Sbjct 12603 GCGACCAGCCGCAAGCATGGCTTCAATACACTGCGTCAGTCACCGATGTAAATATATTTG 12544 Query 8720 ACGCCATCTTTATGGAGGCGCTTTCCTGGCGTCTAGCGGCAGCCATCAATATGGCGC--T 8777 || | | || || || ||||| | |||||| |||| | || | | | || | | Sbjct 12543 ACTCATTATTCATTGATGCGCTGGCATGGCGTTTAGCTG--GCGAACTAGCACGCCCATT 12486 Query 8778 GACCGGAAGCGCAGATCTCGGTAACAATGCACTGACGATGTACAACCGTGT-GATCCTGA 8836 | | | || | | || ||| | ||| | |||||||| | ||| ||| | Sbjct 12485 GGCTTCTAATGCTGGTATCAGTAGTGAAGCATTTCAGATGTACA-CAATGTCGATTGCTA 12427 Query 8837 GCGCTGGCTCACATAGCCAGAACGAATCACAGGAGCC--ACAACCGCCGGTAGATGAGTT 8894 ||||| | ||| || | |||||| ||||| || | | | || || Sbjct 12426 ATGCTGGTGCGCATTCCCTTGATGAATCATCAGAGCCTAACGATTACATG--GACCCATT 12369 Query 8895 CACAGCAGCGAGGTTGTCATAATGGCTTTTAGCTGGATTCAACCGAGCTTTGCCGGTGGT 8954 ||| | ||||||||| || ||||||||| |||| ||||||||||| ||| | ||||| Sbjct 12368 CACCGAAGCGAGGTTATCGTAATGGCTTATAGCATCATTCAACCGAGTTTTTCTGGTGGC 12309 Query 8955 GAAATTGGTCCGTCACTGTATGGCCGCATTGATATGTCAAAGTATCAGGTGGCACTGCGC 9014 ||||| | || || ||||| || |||||| | |||| || || | || Sbjct 12308 GAAATCGCACCTAGCCTTTATGGGCGTATTGATCTAGCAAAATACTCTACCGCTTTACGT 12249 Query 9015 AAGTGCGATAACTTCATTGTTCGCCAATATGGTGGTGTAGAGAACAGACCAGGTACGCGC 9074 ||||| || ||||| |||| || |||||||| || | || || |||||||| || Sbjct 12248 AAGTGTGAAAACTTTCTTGTGCGTCAATATGGCGGCATTGAAAATAGACCAGGAACTAAG 12189 Query 9075 TTTGTTGGTCCTGCTAAATACCCTGATCGCAAGTGCCGGTTAATCCCGTTCCAGTTCTCG 9134 ||| ||| | || ||||||||| | || ||||| || ||||||||||||||| Sbjct 12188 TTTATTGCGGCGGCAAAATACCCTAACAAGAAATGCCGCTTGATCCCGTTCCAGTTCAGC 12129 Query 9135 ACCGTACAGACCTATGCTCTGGAGTTCGGGCACAACTATATGCGAGTTATCAAAGACGGC 9194 ||||| || || || || || || | || | || || ||||| || ||||| ||||| Sbjct 12128 ACCGTGCAAACTTACGCCCTTGAAATGGGTGATAAGTACATGCGCGTGATCAAGGACGGT 12069 Query 9195 GCTTATGTTCT-------GAC---GACCAGCGATGTGATTTAT--GAGCTGGCGATGCCG 9242 | | || || ||| || || | || ||| || || || | || Sbjct 12068 GGGCAGGTGCTTTATGCAGACAGTGAGCACAAGGGCGAAATATTCGAACTTGCAACACCT 12009 Query 9243 TATGCTGACACTGACCTTTTCCGCATTAAATTCACGCAGAGCGCCGATGTTCTGACGCTG 9302 ||| || |||| || ||| | ||||| || ||| || || || |||| | Sbjct 12008 TATAACGAATCTGATCTATTCAATTTAAAATTTACACAGTCAGCAGACGTAATGACTATC 11949 Query 9303 GTGCATCCCGCATACCCGCCGAAAGAACTGCGCCGCTATGCGCACGACAACTGGCAGATC 9362 || ||| | | || || |||| ||||| | ||||||| || ||| | ||| | | Sbjct 11948 GTACATGCTGATTATCCACCGATGGAACTACAGCGCTATGATCATGACGATTGGAAACTA 11889 Query 9363 GTCGATGTCACCACCAAAAACGGGCCGTTCGAAGATATCAACGTTGACGA-GACTGTGAA 9421 || ||| || || || || ||||||||||||||| || | || || || Sbjct 11888 GTTCCTGTTGAAACGCGCAATGGCCCATTCGAAGATATCAACACGGATAAAGAGCGT-AA 11830 Query 9422 GGTATACGCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAAGTTCTGCCATCTTTGG 9481 | |||| | || ||||| | |||||||| Sbjct 11829 GCTATATGTTAGCGCCAGTACAGGTGATGTAACGCTGACGGCAACGCATAATATCTTTGG 11770 Query 9482 TGCTGAGCAGGTTGGAAAACTGTTTTATCTCGAGCAGCCTGCGGTTGATTCCGTTCCTGT 9541 |||||| |||||| |||| ||||| | ||||||| || ||||| | || || || Sbjct 11769 TGCTGAATTGGTTGGCAAACAAATTTATATTGAGCAGCAAGCAATTGATGCTGTACCAGT 11710 Query 9542 CTGGGAGACCAGCAAGACCACAGCAATCAACGACGTTCGCCGTGCAGACAGCAACTACTA 9601 ||||| || |||||| || | || || |||||||||| || ||||| Sbjct 11709 TTGGGAAACTGACAAGACAACTAACGTTAATGATCAACGCCGTGCAGGTGCTAATTACTA 11650 Query 9602 CCGCGCCAATACTGCTGGTAAGACCGGGACCCTTCGCCCGTCTCACACTGAAGGTATGTC 9661 ||| || |||||||| ||||| | ||| || | | || || ||||| ||||||||| Sbjct 11649 CCGAGCTAATACTGCAGGTAAAAGCGGAACATTAAGGCCATCACACACAGAAGGTATGAG 11590 Query 9662 TTGGGATGGATGGGGCGGTACCGGATCAGATGATACCGGGATCCAGTGGGAGTACCTGCA 9721 |||||||| ||||||||| || | || || |||||||| ||||| || Sbjct 11589 CTGGGATGGGTGGGGCGGTGACG------------CTGGTATTCAGTGGGAATACCTTCA 11542 Query 9722 CAGCGGTTTCGGCATTGCAAAAATAACAGCAGTGGCTGGC---GATGGCCTCACAGCAAC 9778 || ||||||||||| | ||||| | | || | || || || | ||||| || Sbjct 11541 TAGTGGTTTCGGCATCGTTAAAATCAATTCTGT---TAGCACTGACGGTTTAACAGCTAC 11485 Query 9779 TGCCGATGTGGTTTCGTTCATTCCATCTCAGGTTGTTGGCTCCGCTAACGCCAGCTATAA 9838 | | || ||||| | ||||||||| | | ||||| | ||||| | || || Sbjct 11484 GGGTAAAGTTGTTTCATACATTCCATCAAATGCCGTTGGTGAAGAAAACGCTACGTACAA 11425 Query 9839 GTGGGCAAAATACGCGTGGAACAGCGTTAACGGCTACCCGAGCACCGTTGTTTACTACCA 9898 |||||| | | ||||| || |||||||||| ||||| ||| | || || || Sbjct 11424 GTGGGCTCGTTCGGTTTGGAATGATGTAGACGGCTACCCAAGCACTGTTATGTATTATCA 11365 Query 9899 GCAGCGACTGTACTTTGCCGCGTCTTCTGCGTATCCGCAAACCATCTGGGCAAGCCGAAC 9958 |||||| | | ||||| | ||| ||| ||||| ||||| || ||||| || || | Sbjct 11364 GCAGCGGTTATTTTTTGCTGGCTCTCGTGCTTATCCTCAAACGATTTGGGCGAGTCGTAG 11305 Query 9959 AGGAGATTATACGGACTTCGGCAAGAACAACCCGATTCAGGATGACGATCGCATCATCTA 10018 || || |||| ||||| || ||||| ||||| || || ||||| || || |||||||| Sbjct 11304 TGGGGACTATAAAGACTTTGGTAAGAATAACCCCATACAAGATGATGACCGTATCATCTA 11245 Query 10019 CACCTACGCCGGACGTCAGGTGAATGAGATCCGTCACCTTATTGATGTTGGTAACCTGGT 10078 |||||| || || || || || ||||| || |||||| | |||||||| ||| ||||| Sbjct 11244 CACCTATGCAGGGCGCCAAGTTAATGAAATTCGTCACTTAATTGATGTGGGTTCGCTGGT 11185 Query 10079 CGCTCTGACATCTGGCGGGGAATATACGATATCCGGGGACCAGAATAAGGTCCTCACGCC 10138 || | || ||||| || || ||| || | ||||| ||||| || || | ||||| Sbjct 11184 GGCCTTAACGTCTGGTGGTGAGTATCAAATCACTGGGGATCAGAACAAAGTATTAACGCC 11125 Query 10139 ATCGGCTTTCTCGTTCAGCTCTCAGGGGAATAACGGATCAAGTAACGTGCCACCTATCGC 10198 | |||||| || || || || ||| || | ||| |||| |||||||| || Sbjct 11124 AAGCAGTTTCTCTTTTTCTTCGCAAGGTGCTAATGGCTGTAGTGACGTTCCACCTATTGC 11065 Query 10199 TGTGGCTAACATCGCATTGTTCATCCAGGAGAAAGGCAGTGTTGTGCGTGATCTGGCCTA 10258 || || || || || |||| ||||||||| ||||| || | |||||||| || || || Sbjct 11064 CGTTGCCAATATTGCCTTGTACATCCAGGAAAAAGGTAGCGCAGTGCGTGACCTCGCATA 11005 Query 10259 CTCTTTCGATGTCGACGGGTATCAGGGAACCGACCTGACCATACTGGCCAACCACCTTTT 10318 || ||||| || |||||||| || || ||||| | ||||| |||| || ||||| || Sbjct 11004 TTCATTCGACGTTGACGGGTACCAAGGTACCGATTTAACCATCATGGCTAATCACCTATT 10945 Query 10319 CCAGAAGCATAGCATTGTCGACTGGTCATTCTGCATTGTGCCGTACAGCAGCGCTTTCTG 10378 || || ||| | || ||| | || | || || || ||| | || | || Sbjct 10944 TCAACGCCACCAGATTATTGATTGGGCGTTTTCTATCGTTCCTTACTCAATAGCCTGGTG 10885 Query 10379 CATTCGTGATGACGGCAAGTTGCTGGTGCTCACCTATCTGCGCGATCAGCAGGTTTTCGC 10438 ||||||||||| || || ||||| | || || ||| | || ||||| || || || Sbjct 10884 TATTCGTGATGATGGTAAATTGCTTTCATTGACGTACCTGAGAGAGCAGCAAGTGTTTGC 10825 Query 10439 CTGGGCACCGCAGTCCAGTACTGGTAAATACGAAAGCACCTGCTCAATCAGTGAAGGCAG 10498 ||||| || || | | || ||| ||| || ||| ||||||||||||| Sbjct 10824 TTGGGCGCCACAAGAAACTGACGGGCAATTTGAATCAACTTGCAGTATCAGTGAAGGCAA 10765 Query 10499 CGAGGATGCTGTTTACTTCGTGGTTAACCGTACTATTAACGGACAGACAAAACGTTACAT 10558 || ||||| ||||||||| | || ||||| || || || ||||||||| Sbjct 10764 TGAAGATGCGGTTTACTTCATTGTGTGCCGTAAAGTTGGTGGCGGTACCGTACGTTACAT 10705 Query 10559 AGAACGCCTGTCCAGTCGTCTTTTCACCAACGATGAAGATGCGTTCTTTGTAGACTGCGG 10618 ||| || | |||||||| || ||||| || ||||| |||||||| || | || Sbjct 10704 AGAGCGTTTAAGTAGTCGTCTATTTACCAAAACAGAGGATGCTTTCTTTGTTGATTCAGG 10645 Query 10619 ACTGAGCTACGACGG 10633 || ||||| ||||| Sbjct 10644 CCTTAGCTATGACGG 10630 Score = 493 bits (546), Expect = 3e-135 Identities = 634/871 (73%), Gaps = 5/871 (1%) Strand=Plus/Minus Query 653 CTGGTGGTGAAGAATGACAGCCGAAGCCATGTCGCCGGAAGAGCAACTCGTTGAGGATGT 712 |||||||||| ||||| | |||||||||| || ||||| ||||| || | ||| | Sbjct 19672 CTGGTGGTGAGCAATGATTG---AAGCCATGTCACCAGAAGAACAACTGATTAACGATAT 19616 Query 713 CGCCTCGTTCACGTATGACCCGCTGGGCTATGCGCTGTACGCGTTTCCTTGGGGTGAGGA 772 || | ||| ||| |||||||| | ||||||| || || || ||||||||||| || | Sbjct 19615 CGGCATGTTTACGCATGACCCGTTAAGCTATGCACTATATGCTTTTCCTTGGGGGGAAGC 19556 Query 773 TGGCACAGAGCTGGCACACGCAACCGGCCCGCGCAAATGGCAGGCCGACGCATTCCGCGA 832 ||| || || || | | | |||| || || || ||||||| ||||| | || || Sbjct 19555 TGGTACCGAACTTGAAAATGCAAGTGGGCCTCGTCAATGGCAAGCCGATACGTTAAATGA 19496 Query 833 GATACGCGATCATCTCCAGAATCCCGCGACGCGTCACCAGCCGCTGATGCTGTCTCGTGC 892 ||| | || ||| | | ||||| | ||||| ||||| | || | ||| || Sbjct 19495 AATAGGTGAACATTTACGTAATCCTGAAACGCGATTTCAGCCATTATTGATATCTGTCGC 19436 Query 893 ATCCGGCCACGGCATCGGTAAGTCCGCTTTCATCTCGATGCTGATTAACTGGGGCATGTC 952 ||| || ||||| || || || || ||| |||||| | || || ||||||||| Sbjct 19435 ATCAGGTCACGGTATTGGGAAAAGTGCGAACATATCGATGATCATCAAGTGGGGCATGGA 19376 Query 953 CACCTGCGAAGACTGCAAGGTTGTGGTTACCGCCAACACCGACAATCAGCTGCGTACAAA 1012 |||||||||||| || ||||| || || || || |||||||| || ||||| || || || Sbjct 19375 CACCTGCGAAGATTGTAAGGTGGTTGTCACTGCTAACACCGAAAACCAGCTACGAACTAA 19316 Query 1013 GACATGGCCTGAAATCATCAAATGGTCGAACCTGGCTATCACGAAAGAATGGTTTACCTG 1072 |||||||| ||||| || ||| ||| ||||||| || || ||||||||||| Sbjct 19315 AACATGGCCAGAAATTGCGAAGTGGCAACGCCTATCTATCACCAAGGACTGGTTTACCTG 19256 Query 1073 CACCGCCACGGCGATGTACAGCAACGATCCAGGTCACGACAAACGC-TGGCGCGCTGACG 1131 ||| || || || ||| ||| || ||| ||||| | || || ||||| ||||| | Sbjct 19255 CACAAAAACAGCTATCTACTCCAATGACCCAAATCACG-CTAATGCATGGCGTGCTGATG 19197 Query 1132 CAATCCCGTGGTCTGAGCACAATACCGAGGCCTTCGCAGGGCTGCACAACGAGCGTAAGC 1191 | | |||||||| ||| |||| || ||||| |||||||||||||| || || | |||| Sbjct 19196 CTGTGCCGTGGTCAGAGAACAACACAGAGGCATTCGCAGGGCTGCATAATCAGGGCAAGC 19137 Query 1192 GCATTATCGTGGTGTTCGACGAAGCGTCCAACATTGCCGATCTGGTATGGGAAGTAGCAG 1251 |||| || | | ||||| || || || |||||||| ||||| || |||||||| || | Sbjct 19136 GCATCATTCTAATTTTCGATGAGGCTTCAAACATTGCGGATCTTGTGTGGGAAGTCGCTG 19077 Query 1252 AGGGTGCGCTTACGGACGAGGATACCGAAATTATTTGGGTGGCGTTTGGTAACCCGACGC 1311 ||||||| | || || ||| |||| ||||| || ||| | ||||||||||||||||| | Sbjct 19076 AGGGTGCTTTGACAGATGAGAATACAGAAATCATCTGGATAGCGTTTGGTAACCCGACAC 19017 Query 1312 GTAACACTGGGCGTTTCCGTGAATGTTTCCGCAAATACAAACACCGCTGGAAGTGCGCGC 1371 ||||||| ||||||||||| || |||||||| || | || ||||||||||| || Sbjct 19016 GTAACACAGGGCGTTTCCGCGAGTGTTTCCGTAAGTTTAAGCACCGCTGGAAAACTAAGC 18957 Query 1372 AGATTGACAGCCGCACCGTGGAAGGCACCAACAAGCAGCAACTGCAAAAGTGGGTGGACG 1431 ||||||| ||||| || || |||||||| ||||| | || | | || ||| | || | Sbjct 18956 AGATTGATAGCCGTACGGTTGAAGGCACGAACAAAGAACAGATTGATAAATGGATTGAAG 18897 Query 1432 ACTACGGCGAAGACAGCGACTTCGTGAAGGTTCGCGTGCGCGGGATCTTCCCTGATGCGT 1491 || ||||| || |||||||| || || ||||| |||||||| |||||||| | | Sbjct 18896 ACCGGGGCGAGGATAGCGACTTTGTTAAAGTTCGTGTGCGCGGTATCTTCCCATCAACCT 18837 Query 1492 CTGAAAACCAGTTTATTCCGTCTGGCTTGAC 1522 |||||| || || || || ||||||| || Sbjct 18836 CTGAAACTCAATTCATACCTACTGGCTTAAC 18806 Score = 398 bits (440), Expect = 2e-106 Identities = 964/1442 (67%), Gaps = 27/1442 (2%) Strand=Plus/Minus Query 3447 TGCTGACTGGTGCGCAGGGTGACACATCAA--CCGCAAACACCAGCGGTAAAACGCTGCT 3504 |||| || |||||||||||| ||| | ||| | ||| ||||||||||||||||| || Sbjct 17855 TGCTAACAGGTGCGCAGGGT-ACA-ACCAATGCAGCATCAACCAGCGGTAAAACGCTACT 17798 Query 3505 TGGTCAGTAACGGAGTAGGCAGAGATGGCGGAAACCGAA-AAAG-AGCGCCTGCTGAAGC 3562 ||||||||||| | || ||||| | | |||| || | | || | Sbjct 17797 TGGTCAGTAACCTAACGGG-------GGCGGTATGAGTTTAAAGCAGGATTTATTAAAAC 17745 Query 3563 AACTCGCACAGCTGAAGAATGAACGCACATCGTTCGAATCGCACTGGCGTGATCTGAGTG 3622 ||||| | ||||| |||||||| ||| ||| || || |||||||| || || | Sbjct 17744 AACTCTCGCAGCTTAAGAATGAGCGCCAATCATTTGAGCCGCACTGGAAAGAGCTTGCAG 17685 Query 3623 ACTTCATCAATCCGCGTGGCTCCCGCTTTCTGACGTCTGATGTAAACCGTGATGATCGCC 3682 | | | || ||| || | || ||| || || || || || || | |||| | | Sbjct 17684 AGTATACGCGCCCTCGTAGCACTCGTTTTAACACATCAGAAGTTAATCGCGGTGATAGAC 17625 Query 3683 GTAACACCAAGATTGTTGACCCC--ACTGGCTCAATGGCTCAGCGCATTCTCTCCAGCGG 3740 |||| || || || |||||| | |||| ||| | |||| | | | || || || Sbjct 17624 GTAATACGAAAATCATTGACCAAGAAGCGGCTAAAT--CAGAGCGTACTTTATCAAGTGG 17567 Query 3741 CATGATGTCAGGCATCACCAGTCCGGCCCGTCCGTGGTTCAAACTGGCAACTCCTGACCC 3800 |||||||||||| || ||||| || |||||| |||||| | || || || || || Sbjct 17566 CATGATGTCAGGGATAACCAGCCCCGCCCGTAAATGGTTCCGTTTAGCTACACCAGATCC 17507 Query 3801 TGACATGATGGACTACGGTCCGGTGAAAATATGGCTGGAAGTCGTGCAGCGTCGCATGAA 3860 |||||||||| |||| | || || ||||| ||||| ||||| || ||| |||||||| Sbjct 17506 TGACATGATGAACTATAGCCCTGTCAAAATGTGGCTTGAAGTGGTTGAGCAGCGCATGAA 17447 Query 3861 CGAAGTGTTCAACAAGTCTAACCTGTATCAGTCACTGCCTGTCATGTACGCAAGCCTGGG 3920 |||||||||||| || || | ||||||||||| || | || | | || Sbjct 17446 TGAAGTGTTCAACCGTTCCAATATCTATCAGTCACTACCGCAAACTTATTCCGATATCGG 17387 Query 3921 TACTTTCGGCACCGGCGCTATGGCTGTTCTGGAAGATGACCAGGACGTGATCCGCACAAT 3980 || || | |||| |||| | ||||| ||||||||| || || || || ||||| | Sbjct 17386 CACCTTTGCCACCAGCGCATTAGCTGTACTGGAAGATAACGAGCGAGTTATTCGCACTGT 17327 Query 3981 GCCTTTCCCGATTGGCAGTTACTACCTGGCTAATAGTCC-GCGCGGCAGTGTCGACACCT 4039 |||||| || | || || || ||| | |||||| | || | | | | || || |||| Sbjct 17326 GCCTTTTCCAGTAGGTAGCTATTACATTGCTAATGGGCCTGATCTG-ACAGTTGATACCT 17268 Query 4040 GCATTCGCCAGTTCTCCATGACCGTGCGCCAGATGGTGCAGGAATTCGGCCTGGATAACG 4099 | | || | ||| |||||| ||||||||| |||| ||| ||||| || || || | Sbjct 17267 GTTTCCGTGAATTCAGCATGACGGTGCGCCAGTTGGTTATGGAGTTCGGGCTAGACAAAG 17208 Query 4100 TCAGTACATCCGTAAAAGGCATGTGGGAAAACGGCACGTATGAAACGTGGGTGGAGGTTA 4159 | ||| || ||| || | ||||| |||| ||| |||| | || | Sbjct 17207 TGAGTGAGCAGGTTAAAAGCCTATGGGACTCTGGCAGCTATAGCCAGTGGATCACCGTCA 17148 Query 4160 ACCACTGCATCACACCTAACGTCAACCGCGACAGCGGGAAGATGGACAGCAAGAATAAGC 4219 || | || || || | || ||| |||||| ||| ||||| ||||| |||| Sbjct 17147 TTCATTCAGTCTACCCAAATTTAAATCGCATCAGCGGCAAGCTGGACGCTAAGAACAAGC 17088 Query 4220 CTTACCGCTCTGTCTATTTCGAGTCTGGCGGCGATTCCGACAAGC-TGCTTCGTGAATCC 4278 | || || || || || ||||| ||| || | || | || || ||||| Sbjct 17087 TGTTTAAATCCGTTTACTTTGAAATGGGCGGTGATAGTGA-ACGCGTTCTACGCGAATCT 17029 Query 4279 GGTTTCGATGAATTCCCGATCCTGGCTCCGCGCTGGGAAGTGAATGGTGAAGACGTTTAC 4338 || || ||||||||||| || |||| || || ||||||||||| || || ||||| ||| Sbjct 17028 GGCTTTGATGAATTCCCTATTATGGCGCCACGTTGGGAAGTGAACGGCGAGGACGTCTAC 16969 Query 4339 GCCTCATCTTGCCCTGGTATGCTGGCACTCGGTCAGGTTAAAGCCCTTCAGGTTGAGCAG 4398 | |||||| ||||| |||||| | || | ||| || ||||| | ||| | ||| Sbjct 16968 GGCTCATCGTGCCCCGGTATGATTGCGTTAGGTAGCGTGAAAGCATTGCAGCTATTGCAA 16909 Query 4399 AAGCGCAAAGCTCAGCTGATCGATAAAGCCACTAACCCGCCGATGGTTGCCCCGACATCG 4458 || ||||| |||| ||| ||||||| ||| || || || ||| || || | || Sbjct 16908 CGCCGTAAAGCACAGCAGATTGATAAAGTCACCAATCCACCTATGCAGGCGCCTGCCTCA 16849 Query 4459 CTTAAGAATCAGCGTGTTTCCCTGTTGCCTGGCGATGTGACATA--TCTCGACGTGTTGA 4516 | |||||||||||| ||||||| ||||||| | | || || | | | | | | Sbjct 16848 ATCAAGAATCAGCGTATTTCCCTTGTGCCTGGTGGAATAACTTACTTACCAATGGCTGGC 16789 Query 4517 CCGGTCAGGACGGTTTCAAACCTGCATACCTGGT-CAATCCGAATACCGCCGACCTGCTG 4575 | | | | | || ||||| || || || || ||| | | || | || | Sbjct 16788 GCTGACCAAATGATT--AAACCGATATTCCAAGTACAGGCCG-ACATTAACGGCTTGATT 16732 Query 4576 GCTGATATTCAGGACACCCGCCAGACCATCAACAGCGCCTATTTCGTCGACCTCTTCATG 4635 ||||||||| || | || | ||||| ||||||||| ||||| |||||| Sbjct 16731 GCTGATATTGGTGATGCTCGTAATCAAATCAAAGAAGCCTATTTCTCTGACCTTTTCATG 16672 Query 4636 ATGCTGCAAAACATCAACACCCGCTCTATGCCGGTGGAAGCAGTGATCGAGATGAAGGAA 4695 ||||| || ||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct 16671 ATGCTACAGAACATCAACACTCGCTCAATGCCAGTGGAAGCAGTTATCGAAATGAAGGAA 16612 Query 4696 GAGAAACTGCTGATGCTTGGTCCGGTGCTGGAGCGACTAAACGACGAAGCGCTCAACCCT 4755 || || || || ||| | || || || | |||| || | ||| || | Sbjct 16611 GAAAAGCTTCTCATGTTAGGGCCTGTCTTACAGCGTTTAGATTCTGAACTACTAGATAAG 16552 Query 4756 CTTATCGACCGCGTGTTCTCCATCATGGCGCGCAAAAACATGCTGCCAGAACCGCCTGAC 4815 | || | || |||| | ||||||||||| |||||| | | |||| ||||| || Sbjct 16551 TTAATTAATCGTACGTTCGCAATCATGGCGCGTAAAAACCTATTACCAGTGCCGCCAGAA 16492 Query 4816 GTTATGCAGGGCATGCCGCTGCGTATCGAATACATCTCCGTGATGGCTCAGGCGCAGAAA 4875 | |||||||| |||| ||| | |||||||| ||||| ||||| |||||||||||| Sbjct 16491 GAAATGCAGGGTATGCAGCTTAAAGTTGAATACATTTCCGTCATGGCGCAGGCGCAGAAA 16432 Query 4876 TC 4877 || Sbjct 16431 TC 16430 Score = 131 bits (144), Expect = 4e-26 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 28042 GTGCATGATCTTCGCCGCACAGCCAGCACGCTGTTGCATGAGGCTGGTTATCCATCTGAC 28101 || |||||| | | | ||||||||||| | |||||||||||||| | | |||||| Sbjct 34138 GTCCATGATTTGAGAAGAACAGCCAGCACATTATTGCATGAGGCTGGCTTTAATTCTGAC 34079 Query 28102 TGGATAGAAAAGGCGCTGGCGCATGAGCAAAAGGGAGTGCGTGCGGTATACAACAAAGCG 28161 |||||||| ||| | || || || ||||| || || ||||| || || |||||||| Sbjct 34078 TGGATAGAGAAGTGTTTAGCCCACGAACAAAAAGGCGTACGTGCTGTTTATAACAAAGCA 34019 Query 28162 GAGTATGCGCGGCAGCGCGCCTACATGTTGCAGCAGTGGGCTGATATGGTTGATTCCTGG 28221 |||||||| ||||||| | | ||||| |||||||||||| ||||||| ||| ||| Sbjct 34018 GAGTATGCAGAGCAGCGCCGCGATATGTTACAGCAGTGGGCTAATATGGTGGATGGTTGG 33959 Query 28222 AT 28223 || Sbjct 33958 AT 33957 Score = 116 bits (128), Expect = 9e-22 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 31570 TTTGAAGACGACACGACGGCGTTAACCAGTTGTGCTTCATAGCCAAGAGTTCCGTTTACA 31629 |||||| || || | || ||||| | ||| || ||||||||||| || ||||| | Sbjct 28715 TTTGAACTAGATACCAAAGCATTAACTAATTGGGCCTCATAGCCAAGCGTACCGTTAATG 28656 Query 31630 ACGTGCGTCTTCTGTGCAACAGCGAACGGGTTCATGCCCCATTGCGCCGCCTGCATGGTT 31689 | ||| || || || || ||||| || ||||||||| ||| || |||||||||||||| Sbjct 28655 ATGTGGGTTTTTTGGGCTACAGCAAATGGGTTCATGTTCCACTGTGCCGCCTGCATGGTA 28596 Query 31690 ACTGCCAGGCAGTCAGACGGCTTACCT-GCAAGATGAGCAGGAACGGTAGCTTTACTGCA 31748 | ||| | ||| || || || ||| | | ||| || | ||||| || ||||||| | Sbjct 28595 ATTGCTAAGCAATCTGATGGATTATTTTGTAAG-TGCTCTGGAACTGTGGCTTTACCCGA 28537 Query 31749 GGCCATCAACTCAGCGAAGCGCA 31771 ||||| | ||||||||||||| Sbjct 28536 TGCCATTAGTTCAGCGAAGCGCA 28514 Score = 96.9 bits (106), Expect = 9e-16 Identities = 187/276 (68%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 27043 GTGCTTACTGATACCAAACTAAAAAACCTCAAGCCGCAGGACAAACTGTATAAGGTTTCG 27102 ||| | || |||| ||| |||| | | | ||||| | ||||| || |||||||| | Sbjct 35137 GTGTTAACCGATAAAAAATTAAAGAGCTTAAAGCCAGAAGACAAGCTATATAAGGTAGCC 35078 Query 27103 GATCGTGACGGGCTGTATGTTGCGGTGCTTACTTCCGGCTCTGTCTCTTTCCGGTACGAC 27162 ||||||||||| |||||||||| || | | || || | || || | || || Sbjct 35077 GATCGTGACGGTTTGTATGTTGCTGTTACAAAAACTGGTTCCATATCATTTAGATATGAT 35018 Query 27163 TACCGCATTAACGGGCGCCGGGAAACGCTGGTCATCGGTCAGTACGGTCGTGACGGTATC 27222 |||||| |||| ||||| | |||||| | | || | ||| | ||||||||| Sbjct 35017 TACCGCTTTAATGGGCGTAGAGAAACGATAACGTTTGGACGCTACAGCGATGACGGTATT 34958 Query 27223 AGCCTGGCAGAAGCACGAGAAGAACTCATTGCTGCCAAAAAACTGTTAAATGCAGGCCAG 27282 | || ||||||||| ||||| || || | ||||||||| | | || |||||| Sbjct 34957 ACACTTGCAGAAGCAAGAGAAATGCTAATCGATGCCAAAAAGACGCTGAACGCAGGCGTA 34898 Query 27283 TCGCCAGCTGCGGCTAAACGTGACGGTATCAAAAAG 27318 || |||||| | || | |||||||| | |||| Sbjct 34897 TCACCAGCTTCACAGAAGAGAGACGGTATTACAAAG 34862 Score = 84.2 bits (92), Expect = 5e-12 Identities = 185/276 (67%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 11213 TGAGTATCCGCAGCGTGAATTTGAGTTCTACGACGATCCTGTTGATGAAGCTACCGGCAA 11272 ||| ||||| |||||||||||||||||||||||| | || |||||||| || || || Sbjct 10071 TGAATATCCTCAGCGTGAATTTGAGTTCTACGACAACCCAGTTGATGACGCCACAGGTGT 10012 Query 11273 GGTTGAAGTGAAACTTGACAGCAACTGGGATAAAAACGGACGCGTTAAGGTTCGCCAGCT 11332 ||| || | || || || | ||| |||||||| || || | || | ||| Sbjct 10011 GGTAAAAATTAACCTCGATGCTCAGTGGAGCAAAAACGGCCGTGTGTATGTCAGACAGTC 9952 Query 11333 TGACCCACTTCCGCTTTCTGTTCTTGCTGTATTGCCTCGCCTTACCGTCGGAGGATTCTG 11392 ||| || | || || ||| | | || || | ||||| | || || || |||| Sbjct 9951 TGATCCGTTACCTCTATCTATCTTAGCGGTTATACCTCGTTTAGATGTGGGGGGCTTCTA 9892 Query 11393 AT--------GATTAAAGCTCAGATCGTACCCGCTACAGCAGAGCATATCGAAGCCATTA 11444 || || || | ||| ||||||||||| ||| |||||| | || | || Sbjct 9891 ATATGGCAAAGAGTATTGTTCAAATCGTACCCGCAACATTAGAGCA-CGCACAGGCGTTG 9833 Query 11445 TTCCA-CTTGTTCGCCAGGCTGATATCGATGAATTT 11479 | || | |||| | || |||||||||||||||||| Sbjct 9832 GTACAGCATGTTAGACAAGCTGATATCGATGAATTT 9797 >seq2442 Length=9075 Score = 80.6 bits (88), Expect = 7e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2825 CAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTAA 2883 ||||||||||||||| | || || ||||||||||| ||||||||||||| ||||||||| Sbjct 9070 CAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAGCTAA 9012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123662994078528