Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq2595 93.3 2e-14 >seq2595 Length=21780 Score = 93.3 bits (102), Expect = 2e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 43604 TCGCCACAGCCCAGCTTACAGCCCGTCAGCACGCCGCAGGCCGAAATCCCAGCGCCGGCA 43663 ||||| ||||| | ||| | || |||||| | || || ||| || || || || ||| Sbjct 18249 TCGCCGCAGCCAACCTTGCTACCTGTCAGCTCACCCAAGAGCGAGATACCGGCTCCCGCA 18308 Query 43664 GCGTGGGCGATGGAGCCGCACTCGAACTCTCTACCGCTGCTGGACAGCG-TGTTCTCGAT 43722 || ||||||||||| | | |||||||| || | ||||||| ||| | || |||| Sbjct 18309 GCATGGGCGATGGAAGCCAAGTCGAACTCACTGCAAAAGCTGGAC-GCGCTATTTACGAT 18367 Query 43723 CTCCGCGCCGGAATCATCCGGGACAACGCCAAAATAGACTACCTGCAAGGCTACGTCCGC 43782 |||| || || |||||| | ||| | ||||| |||| || |||||| || || || Sbjct 18368 ATCCGAGCAGGGATCATCAGCGACCAGTCCAAATTAGATTATCTGCAACAGTATGTTCGT 18427 Query 43783 GACGTGGTTCGGCAGTGCAA 43802 || || || ||||| || || Sbjct 18428 GAAGTTGTCCGGCAATGTAA 18447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194156596509568