Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq1458 86.0 1e-12 >seq1458 Length=11418 Score = 86.0 bits (94), Expect = 1e-12 Identities = 170/250 (68%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 25039 CAGAAATTTCGAAATCACTTAAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCGT 25098 ||||||| || || |||||| | ||||||||||||| | || | | ||| Sbjct 1590 CAGAAATATCCCGTTCCCTTAAAGCGTTGGCGAAAGAATTACAGGTGCCTGTTGTAGCGC 1649 Query 25099 TATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGACT 25158 | || ||||||||||| |||| || | | ||||| || || ||||||| || Sbjct 1650 TCTCCCAGCTTAACCGTAGTCTGGAGCAGCGGGCTGATAAACGTCCGGTTAACTCTGATC 1709 Query 25159 TGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGACG 25218 |||| || || ||| | || || ||||||||||| ||||| || || || || || | Sbjct 1710 TGCGTGAATCAGGCTCTATTGAGCAGGATGCTGACTTAATCATGTTTATCTATCGTGATG 1769 Query 25219 AAGTGTATAACCCCGACA--GCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAAACA 25276 | |||||| || ||| | ||| ||||| | || || |||||| |||| ||||| Sbjct 1770 AGGTGTATCACGATAACAGTGAACTG--AAAGGTGTAGCAGAAATTATCCTTGGTAAACA 1827 Query 25277 CAGGAATGGC 25286 | |||||| Sbjct 1828 GCGTAATGGC 1837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101526146978304