Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq1844 132 7e-26 >seq1844 Length=102481 Score = 132 bits (146), Expect = 7e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 197080 TCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCG 197139 || |||| || ||||| || | | | | || || ||||| || | |||||| ||| Sbjct 87443 TCTGGATCATAGCAGGCCAGAAGGTATCCTCCATAAGTTCCGGTGCGCTTTCCAGTTCCG 87502 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | ||||||| || |||||||| |||| ||||| | || || |||| |||||| ||| Sbjct 87503 CAGTAGCCTCCAATGACCACCAGGTCCAAGGTGTCCCCGACTCCGTCCAGGTAATCCTTC 87562 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259 || |||||||||||||| ||||| |||||||||||| || || ||||| |||||| Sbjct 87563 TTTAGTTTGAGCCAGCTGTGAGATCGCTTGGCAATCTCATAAGTGGCGTTGTCGTCCAAC 87622 Query 197260 GTCTTGATCATCAATCCCTCGCA 197282 ||||||| ||| | || ||||| Sbjct 87623 GTCTTGACCATGAGGCCTTCGCA 87645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676705373080320