Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value seq2680 107 5e-19 >seq2680 Length=520 Score = 107 bits (118), Expect = 5e-19 Identities = 217/322 (67%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 16226 ACCCGGATAAATATGCCCACATCGATACCGGAGCCATCATTGACCAGCGGCCGGTGAGCG 16285 ||||||||||||| ||||| ||||| ||||| | |||||| | |||||| | | Sbjct 453 ACCCGGATAAATACGCCCATATCGACACCGGTATCCGCATTGATGAACGGCCGATTTCGG 394 Query 16286 TGATCCCGCCTGGTAACCAGTCGCCGCCTGCGAACATCGTGATCAGCTCGTTTTCCGTGG 16345 | ||||| || || ||||| ||||| ||| | ||||||||| ||| |||| Sbjct 393 TTATCCCACCGGGAGTACAGTCACCGCCGAAAAACGTGGTGATCAGCAGTAGTTCGGTGG 334 Query 16346 TGCAGCAAAATATCAGCGTCGAAACGATGCGCGTGAGCTGGGACCAGGCGCAGAACGCTA 16405 |||| || || | || || ||| ||||||||| || | || | |||| Sbjct 333 TGCATCAGGGAATTGCCATCACCACCTTGCAGGTGAGCTGGTCGGCGGTGGAGCAGGCTA 274 Query 16406 TCGCCTATGAAGCGCAATGGCGCCGCAACGACGGGAACTGGGTTAACGTGCCGCGCACCT 16465 | || |||||||| | ||||| || | | || |||||| | || ||||| ||| Sbjct 273 TTGCTTATGAAGCTGAGTGGCGGCGGGATAATGGCAACTGGATAGCCGCCCCGCGAACCG 214 Query 16466 CCACCACGTCATTCGACGTCCCGGGGATTTATGCCGGGCGCTACCTGGTGCGGGTGCGCG 16525 |||| || || || || ||| || || ||||| ||||| | || |||||||| | Sbjct 213 CCACACCGGGTTTTGAGGTGCCGAATATCTACGCCGGACGCTATCAGGCTCGGGTGCGGG 154 Query 16526 CAATCAATGCCGCAGAAATTTC 16547 | || || ||||| || ||||| Sbjct 153 CGATTAACGCCGCTGAGATTTC 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132888280315872