Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_019923.1 Length=42689 Score E Sequences producing significant alignments: (Bits) Value seq2814 298 1e-76 >seq2814 Length=35408 Score = 298 bits (330), Expect = 1e-76 Identities = 424/594 (71%), Gaps = 2/594 (0%) Strand=Plus/Minus Query 847 GCATCAGGCCACGGTATCGGCAAATCGGCCTTCATCAGCATGCTCATCGACTGGG-CAGA 905 |||||||| |||||||| || ||| || ||| ||| ||||| | |||| || Sbjct 19437 GCATCAGGTCACGGTATTGGGAAAAGTGCGAACATATCGATGATCATCAAGTGGGGCATG 19378 Query 906 GAGCACAGCCGTAGACACCCGCGTCGTCGTGACGGCCAACACCGAAACACAGCTGCGCAC 965 || ||| || ||| || || || || || |||||||||| ||||| || || Sbjct 19377 GA-CACCTGCGAAGATTGTAAGGTGGTTGTCACTGCTAACACCGAAAACCAGCTACGAAC 19319 Query 966 CAAGACCTGGCCGGAGATTGCCAAATGGCGCCGGCTCAGCCTGTTCTCGCACTGGTTCAA 1025 || || ||||| || ||||| || |||| || || | | | ||||||| | Sbjct 19318 TAAAACATGGCCAGAAATTGCGAAGTGGCAACGCCTATCTATCACCAAGGACTGGTTTAC 19259 Query 1026 GACCACGGCCACATCGATCGTTTCCCTCGACCCCAAACACTCCGCATCCTGGCGCGCCGA 1085 ||| ||| | ||| ||| ||||| || ||| | | ||||| || || Sbjct 19258 CTGCACAAAAACAGCTATCTACTCCAATGACCCAAATCACGCTAATGCATGGCGTGCTGA 19199 Query 1086 CGCCGTGCCATGGTCCGACACCAACACCGAGGCATTCGCCGGCCTGCACAACGAGGGCAA 1145 || ||||| ||||| || | |||||| ||||||||||| || ||||| || ||||||| Sbjct 19198 TGCTGTGCCGTGGTCAGAGAACAACACAGAGGCATTCGCAGGGCTGCATAATCAGGGCAA 19139 Query 1146 GCGCATCATCCTGATCTTCGATGAGGCTTCGAACATCAGCGACAAGGTGTGGGAAGTGGC 1205 ||||||||| || || |||||||||||||| ||||| || ||||||||||| || Sbjct 19138 GCGCATCATTCTAATTTTCGATGAGGCTTCAAACATTGCGGATCTTGTGTGGGAAGTCGC 19079 Query 1206 TGAGGGTGCGCTGACTGACGAGAACACCGAGATCATATGGGTGGCATTCGGCAACCCGAC 1265 ||||||||| |||| || ||||| || || ||||| ||| | || || || |||||||| Sbjct 19078 TGAGGGTGCTTTGACAGATGAGAATACAGAAATCATCTGGATAGCGTTTGGTAACCCGAC 19019 Query 1266 GCGCAACACAGGCCGATTCCGCGAGTGCTTCCGCAAGTTCAAGCACCGGTGGAAGTGCAA 1325 || |||||||| || ||||||||||| ||||| ||||| |||||||| ||||| || Sbjct 19018 ACGTAACACAGGGCGTTTCCGCGAGTGTTTCCGTAAGTTTAAGCACCGCTGGAAAACTAA 18959 Query 1326 GCAGATCGATGCCAGGACTGTTGAAGGCACCAACAAGACCCAGCACCAGAAGTGGATTGA 1385 |||||| ||| | | || ||||||||||| ||||| ||| | || |||||||| Sbjct 18958 GCAGATTGATAGCCGTACGGTTGAAGGCACGAACAAAGAACAGATTGATAAATGGATTGA 18899 Query 1386 TGACTGGGGTGAAGATTCCGACTTCGTCCGCGTCCGTGTGCGCGGCATGTTCCC 1439 ||| |||| || ||| |||||| || || ||||||||||| || ||||| Sbjct 18898 AGACCGGGGCGAGGATAGCGACTTTGTTAAAGTTCGTGTGCGCGGTATCTTCCC 18845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136478558206368