Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq2599 143 8e-30 >seq2599 Length=15424 Score = 143 bits (158), Expect = 8e-30 Identities = 390/589 (66%), Gaps = 6/589 (1%) Strand=Plus/Plus Query 23042 AGCAATAAATGGCTTCAGGCAGTCAGGGAGTTAGATTACTGCGTTCTGTGTGGGCGGTAT 23101 || || |||||||| || || | || | || | ||| || | |||||||| || Sbjct 10776 AGTAAAAAATGGCTGGCTGCCGTTGGTCAGATTGAATGCTGTGTCCGGTGTGGGCAATAC 10835 Query 23102 GGGGTTCAGGCCGCGCACAGAAACGAAGGGAAGGGAATAGGTCTTAAGGTCGACGACAGT 23161 || ||||||| ||| |||||||| || || || || || || | ||||| || ||||| Sbjct 10836 GGCGTTCAGGTCGCCCACAGAAATGAGGGCAAAGGCATGGGGTTGAAGGTGGATGACAGC 10895 Query 23162 TTAACAGCGGCGCTTTGTCCGCCATGTCATGAGCGAATCGACAACGGCAAAGACTTAAGC 23221 | || || || || ||||| | || ||| | ||||| || ||| ||| | ||| Sbjct 10896 CTGACCGCAGCACTGTGTCCCGCCTGCCATTATGCCATCGATAATGGCGCTGACATGAGC 10955 Query 23222 CGGGAAGAAAGGCGATCTGAAATGGACCGCGCTATCGTCCTGACGCTGCAAAAGCTAACG 23281 || ||| | | || |||||| | | || ||||||||| | || |||| ||| Sbjct 10956 AAAGAGGAACGCAGGCACGAGATGGACAGGTCGATTGTCCTGACGATCAAAGAGCTGACG 11015 Query 23282 AGAGAAGGGAG-GGTAACGGTGCGATGAATCAATACCGAATAGTCCTGCCCTGGCCGCCG 23340 || | |||| ||| | | ||||| ||||| || ||||| ||||||||| Sbjct 11016 AG-GCGGGGACTGGTTGGCGCACTATGAAGACTTACCGCTTAAAACTGCCGTGGCCGCCG 11074 Query 23341 TCAGTAAACAAGTACTGGCGACACTCAAGAGGCATCCACTACATCAGCGATTGGGGTAAG 23400 || | || | || ||| ||||||||| | |||||||||| || ||| || Sbjct 11075 ACAATTAATCATTATTGGAAACACTCAAGGTGGGGTCACTACATCACAGAGAAGGGCAAA 11134 Query 23401 CGATACCGACGAGAAG-TAATCGAAATCATTCAGCAGCACAAGTTAGACATAAAAATCCA 23459 ||||||| |||| | ||| | |||| ||||||| | |||||||| | || Sbjct 11135 GATTACCGAC-AGAACATCATCACACTCATCAAGCAGCAGGACTTAGACATCCTCACCCC 11193 Query 23460 ACCCCGCATCAGAATCATCATCCACGCAGCACCC-CCCGATAACCGCAAACGCGATTTGG 23518 ||||||||||||| | ||| ||| ||||| || || ||| | | ||| | | Sbjct 11194 CTCCCGCATCAGAATAACAATCACTGCA-CACCCTCCAGACCGACGCCGAAGAGATATCG 11252 Query 23519 ACAATCTACCCAAAGCCGTTTTTGACGCACTCACCAGTGCGGGCTTCTGGCTGGATGACG 23578 | || || |||||||| || || ||| |||| || ||| |||||| | ||||| | Sbjct 11253 ATAACCTGCCCAAAGCGGTCTTCGACTCACTGACACATGCCCATTTCTGGGTTGATGATG 11312 Query 23579 GTCAGGTAGACGATATGCGCATCAAGCGCTGTCAGGCGGTTAAAGGCGG 23627 ||| | || |||||||| |||| ||| | | | |||||||||| Sbjct 11313 AGCAGATTGATGATATGCGGATCACGCGGGGCGAATTGATTAAAGGCGG 11361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152228422535264