Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_019933.2 Length=43870 Score E Sequences producing significant alignments: (Bits) Value seq348 96.9 1e-15 >seq348 Length=55286 Score = 96.9 bits (106), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 6701 TCTGTGGGGTCTGCCGGTTGTTGCAACTCAGGCGATGGCTGTGGGCCAGTTCCTGACCGG 6760 |||||||| | ||||| || ||||| |||| |||| | ||||| | ||||||||||| Sbjct 19855 TCTGTGGGCGCGCCCGGTCGTGGCAACCAAGGCCATGGATCTGGGCGACTTCCTGACCGG 19796 Query 6761 TGCCTT--TGATGCCGGTGCACAGGTCTTTGATCGCTGGGCCGCCCGCGTTGAGGTTGCC 6818 |||||| |||| ||||| |||| || || ||| | || | | ||| || Sbjct 19795 TGCCTTCAAGATG--GGTGCTCAGGGCTGGGACCGCGAGCAGGCGAACATCACGGTCTCC 19738 Query 6819 ACCGAGAATCAGGATGACTTCATCAAGAACATGGTCACCATCCTGGCCGAAGAGCGCTTG 6878 | | || | | || ||||| |||||||||||||||||||||| ||| ||| | || Sbjct 19737 AACCAGGACCGCGACAACTTCGTCAAGAACATGGTCACCATCCTCTGCGAGGAGGACGTG 19678 Query 6879 GCTCTGGCGGTCTATCGTCCGGAGTCCTTCATCAAGGGT 6917 | ||| | |||| || || ||| |||| | |||||| Sbjct 19677 GGCCTGACCGTCTTCCGCCCCGAGGCCTTTGTGAAGGGT 19639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140257629675776