Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value seq348 102 2e-17 >seq348 Length=55286 Score = 102 bits (112), Expect = 2e-17 Identities = 168/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 13910 CCGTTCAGCAGCTGGCCTTCTTCCTTCAGCGCCAGACCGTACATGAGGCGGTTGTTGACG 13969 || ||||||||||| ||||||| |||||| ||| |||||||| || ||| ||||| | Sbjct 20102 CCCTTCAGCAGCTGCGCTTCTTCTTTCAGCTTCAGGCCGTACATCAGACGGCCGTTGATG 20161 Query 13970 TATGACTGCAGCATTGGCGCATCGTCCATAACCTGACGTGACGCCTGCACCCAGTGGGCG 14029 || | ||||||||| |||||| || |||||| ||||| | | |||||||||| Sbjct 20162 TAGGCCTGCAGCATGCTGGCATCGCGCAGAACCTGCTTGGACGCGCGGATCCAGTGGGCG 20221 Query 14030 ATGGTCTTCACGTTTGCGGTCTGCTTGCT-GAAGGTAATATCCGATTCAGGTTTCAG--- 14085 ||||| | || || | | | ||| ||| | | ||| || || || ||| | Sbjct 20222 ATGGTGGCAATTTTGGCCGAGT-CCAGCTCGAACGCCAGATCGGACTCCGGCTTCGGATT 20280 Query 14086 ---CGCCTTCTCGGCCACCACATCGGCGTTATTGGTAAACACTTCTTCACGGACATATTC 14142 || |||||||||||||| || ||||| ||||| || | || |||||||| || Sbjct 20281 GGTCGGGTTCTCGGCCACCACGTCCGCGTTGTTGGTGAAGCCGGTCTCGCGGACATACTC 20340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124712558381632