Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq2599 122 2e-23 >seq2599 Length=15424 Score = 122 bits (134), Expect = 2e-23 Identities = 219/314 (70%), Gaps = 7/314 (2%) Strand=Plus/Plus Query 25784 ACAACAATCTCAGTAGTGTACTGATCTTGACCTTGCTGGTTCTGCCACTTGCGCGTGCGC 25843 || |||| ||| || || || ||||||| | || |||| ||||||||||| || || Sbjct 48 ACCACAACCTCCGTTGTATAACGATCTTGTCTCTGTTGGTCTTGCCACTTGCGTGTTTGC 107 Query 25844 AACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCC 25903 || | || ||||| |||| || |||||| | || || ||||| || |||||| Sbjct 108 AATTGACCCTCAATATAAATCTGGCTGCCTTTCCTCAGATATTCACCGGCAACTTCTGCC 167 Query 25904 AACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGC 25963 | || ||| | | || ||||||||||| ||||||||||| | ||| |||| ||| Sbjct 168 AGTTTTCCGAACAGAACCACACGGTGCCATTCTGTTTTTTCCCTCAGCTCACCTGATTGC 227 Query 25964 TTGTCTTTGTACTGC-TCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCGTTAGG 26022 |||||||| | ||| ||| ||| || | | | ||| | || ||| ||| || || Sbjct 228 TTGTCTTTCCA-TGCTTCAGAGGTAGCCAGTGTGATATTGGTGACTGCGCCACCATTGGG 286 Query 26023 CATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCT-TGTTAATTC 26081 || | ||||||||||| || ||||||| ||||| | || ||| | |||||| | Sbjct 287 TGAGTAACGTACTTCCGGGTCTTGACCTAAGTGACCGACCA-GAATACATCTGTTAACGC 345 Query 26082 CGC---GTGCCATT 26092 ||| |||||||| Sbjct 346 CGCGTTGTGCCATT 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123656594296192