Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2563 145 9e-30 >seq2563 Length=28365 Score = 145 bits (160), Expect = 9e-30 Identities = 281/410 (69%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 ||||||| || || ||| ||||| || || || | || ||||| || || |||||| Sbjct 8228 AATGGTGCAAGGTGCTTTTTCACACCGATTGGTCCCATACCCGGACCACCGCCACCATGT 8169 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACC-ATAGTCACATGG 138280 ||||||||||| || ||||| | ||| || || | ||||| ||||| ||| | || Sbjct 8168 GGAATACAGAAGGTTTTATGCAGATTAAGGTGTGAAACATCAGCACCGATA-AAGCCCGG 8110 Query 138281 TTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATT 138340 | | | || ||||| ||||| | ||| || ||||| || || |||||||| ||||| Sbjct 8109 CGTAGTGATGCCAACCTGAGCATTCATATTAGCGCCATCAAGGTAAACCTGACCGCCATT 8050 Query 138341 GTCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGG 138400 | |||| || | ||| | ||| | || || |||| ||||||| ||||| || || Sbjct 8049 CTGGTGAATAATGTCACAAACCTGACGAATAGTTTCTTCATATACACCGTGAGTTGACGG 7990 Query 138401 ATATGTAATCATAATACATGAGAGTTCA--AATGTATTCATGATTGCTTTCTTCTCTAGA 138458 ||| || | ||| ||||| | |||||| | || || | |||||| | || ||| Sbjct 7989 ATAGGTCACCATGATACAGGCCAGTTCATCACGGTGTT--TTTCTGCTTTTTCCTGTAGG 7932 Query 138459 TCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCC 138518 || | | || || |||||||| | |||||| | || | || ||| |||| || ||| Sbjct 7931 TCGGTCAGATCGATATTGCCATCTTTATCACAATCAACCACAACCACTGTCATGCCAGCC 7872 Query 138519 ATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACA 138568 || ||| || || || || ||||| || || ||| ||||| || Sbjct 7871 ATATGTGCTGATGCCGGGTTTGTACCATGCGCAGAGCTTGGGATCAGGCA 7822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578977671857280