Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_020850.1 Length=38374 Score E Sequences producing significant alignments: (Bits) Value seq2814 104 6e-18 >seq2814 Length=35408 Score = 104 bits (114), Expect = 6e-18 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 6444 TTTGCTGAGTTTATGGCAAAGGGTCAGGTCATGGTTCCTAACCATTTGCAAGGCAAGCCC 6503 || ||||| | |||||| |||| | | || ||||| | || || ||| || || Sbjct 28519 TTCGCTGAACTAATGGCATCGGGTAAAGCCACAGTTCCAGAGCACTTACAAAATAATCCA 28578 Query 6504 GCTGACTGTATGGCCGTTGCCATGCAGGCAGCCTCGTGGGGAATGTCTCCATTCTCAGTT 6563 | || || | || || |||||||||| || |||| ||| ||||| | || Sbjct 28579 TCAGATTGCTTAGCAATTACCATGCAGGCGGCACAGTGGAACATGAACCCATTTGCTGTA 28638 Query 6564 GCCCAAAAGACGCACCTAGTTAACGGAACTCTTGGATATGAAGCCCAACTCGTTAACGCT 6623 |||||||| || ||| | ||||||| || ||||| ||||| |||||| | ||||| ||| Sbjct 28639 GCCCAAAAAACCCACATCATTAACGGTACGCTTGGCTATGAGGCCCAATTAGTTAATGCT 28698 Query 6624 GTGGTTACTTCTTCGCGAGCCGTTAAAGGCCGCTTTCATTACGAATA 6670 |||| || ||| ||| || ||||||| |||||||||||||| Sbjct 28699 TTGGTATCTAGTTCAAAAGCAATTCAAGGCCGTTTTCATTACGAATA 28745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122671027816448