Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq2606 140 7e-29 >seq2606 Length=3143 Score = 140 bits (154), Expect = 7e-29 Identities = 349/528 (66%), Gaps = 18/528 (3%) Strand=Plus/Plus Query 26124 GCGTATGCGGTCGGCCTGCGCGCGAAGATCGATCAACAAACCGGCTGGCATAAGACGCTC 26183 || ||||| | ||| |||| || || ||||| || ||||||||||||| || || || Sbjct 812 GCTTATGCACTGGGCTTGCGTGCCAAAATCGACGAAGAAACCGGCTGGCACAAAACCCTA 871 Query 26184 TCGAACGTCGCTGTGAATGGCGTCGAAGGGATCAGCAAGCCG--GTTTCGTGGGATTTGC 26241 || || || | ||| || ||||| || || || || | || | |||||| ||| Sbjct 872 TCCAATGTGGGTGTTAACGGCGT--AACGGGTCTATCTGCTGATGTCTTCTGGGATCTGC 929 Query 26242 AGAACCCGGCGACCGATGCGGGTTTCCTCAACGAGAATCAGGTCACGACGCTGATCAACC 26301 | | | || || || | | | || ||| ||||||| |||| || |||||| | Sbjct 930 AAGCGACTGGAACTGAGGCTGATCTGCTGAACCAGAATCACATCACAACACTGATCCGCA 989 Query 26302 GGAACGGCTTCCGATTCTGGGGCTCGCGCA------------CGGCGTCCGACGATCCGC 26349 ||||| || || |||||||| || |||| | || || || || | | Sbjct 990 AAAACGGTTTTCGTTTCTGGGGTTCACGCACTTGCGCTGGCTCTGCTTCTGAGGACTCAC 1049 Query 26350 TGTTCGCGTTCGAAAACTACACGCGCACGGCGCAGGTGCTGGCCGATACGATGGCCGAAG 26409 ||||| | ||||||| |||||| || || || ||||| ||||| || || ||||| || | Sbjct 1050 TGTTCCCATTCGAAAGCTACACCCGTACCGCTCAGGTACTGGCTGACACCATGGCTGACG 1109 Query 26410 CACAGATGGTCGTTATCGACGGCGCGATGATTCCGGCGCTACCGCGCGACGTGATCGAGG 26469 | || ||| | |||||| || ||| || |||| |||||| | ||||| | Sbjct 1110 CGCATATGTGGGCAATCGACAAACCGCTGACCCCATCGCTGGTACGCGACATTATCGAAG 1169 Query 26470 GCATCAACGCAAAAATGCGTGAAATGAAAACCAAGGGCCAGTTGATCGGCGGCTCGGCG- 26528 ||||||| || || | |||||| ||||| | ||| | | || | ||| ||| | Sbjct 1170 GCATCAATGCTAAGTTCCGTGAACTGAAAGCGGGCGGCTACATCATTGACGG-TCGTTGC 1228 Query 26529 TGGTTCGACGCGGAACAGAACGGCGTTGTGGCGCTGAAAGATGGCAAAGCGGTGATCAAT 26588 |||| |||| || |||| | | ||||||| |||||| | ||| || Sbjct 1229 TGGTATGACGACAAAATCAACGATAAAGACACCCTGAAAGCAGGCAAACTGACCATCGAT 1288 Query 26589 TACGACTACACGCCGGTGCCCCCGCTGGAAAACCTCACGCTGCGCCAG 26636 |||||||| || || || || || ||||||||| | | | | |||||| Sbjct 1289 TACGACTATACCCCTGTACCGCCACTGGAAAACATGATGTTACGCCAG 1336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113250548217856