Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_021539.2 Length=38275 Score E Sequences producing significant alignments: (Bits) Value seq2766 82.4 2e-11 >seq2766 Length=35022 Score = 82.4 bits (90), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 3415 GGTGGTGATGTGTTTGAATCTATCGCCATTCACAATTTATTAAAATCGCACTCTGCCAAA 3474 || ||||| || ||||| ||||| ||| ||||| | ||| ||| |||||| Sbjct 17897 GGAGGTGAGGTTTTTGAGGGGATCGCTATTTACAATCAGCTCAAAAATCACAATGCCAAC 17838 Query 3475 ATCAGTATTTACATTGATGGTCTAGCTGGAAGTGGA--GCATCAGTCATTGCGATGGCTG 3532 || | |||| || ||||| |||| | | || || ||||||||||| |||| | Sbjct 17837 ATTACGGTTTATATCGATGGGTTAGCAGCT--TCGATGGCGTCAGTCATTGCCATGGTAG 17780 Query 3533 GTGATGAAATTATTATGCCCAGAAATGCAATGATGATGATTCATAAAGCGTGG 3585 |||||||| | | ||||| | |||||| ||||||||||| |||||| | ||| Sbjct 17779 GTGATGAAGTCAAAATGCCAAAAAATGCCATGATGATGATCCATAAACCTTGG 17727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122354238590816