Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq788 217 1e-51 >seq788 Length=49189 Score = 217 bits (240), Expect = 1e-51 Identities = 237/312 (76%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| || ||||| || | | || | || |||||||||||||| ||||| || | | Sbjct 38707 GTCTCAGGATTGTCGCAAGCGGTGCAGAGGACGAACTTGCGGATGAATCCATCGAGGATG 38648 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| ||| ||| || |||||||||||| | || ||||| |||| ||| Sbjct 38647 TCCTGGAGCTTCGCGGCGTCATGTTCTCCGTTGACGATGTAGCGCTCGTTCTTGTTGTCG 38588 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||||| ||||| || ||||| ||||||||||| |||||||| ||| || ||| Sbjct 38587 ATGTTGGTTTGGGCGCCGAGTTCGCAGCCGAAGTACTTCGTCGGGTAGGTGGGAGGGCGT 38528 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | || | ||| ||||| || | |||||| ||||||| |||||||||||||| || ||| Sbjct 38527 TCCAGGGACTTCGCGATGTCCGCCATGTTCGCGATGACGGTCTTGATGCCGTTTCCTTTT 38468 Query 34561 CCTTCGACCTTGGCGCAGATG-CGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619 ||||||||||| || || | | || ||||| ||||| |||||||| | ||| || || Sbjct 38467 CCTTCGACCTTCGC-CATAAGTCGGGGCATCTTGTATCGGTAGAAGGGGTCGAGAACGTT 38409 Query 34620 GCGGTTAACGTT 34631 |||||| ||||| Sbjct 38408 GCGGTTGACGTT 38397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412827189763952