Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1035 206 4e-47 seq1457 196 8e-44 seq2139 181 2e-39 seq1889 181 2e-39 seq1633 167 4e-35 seq318 163 4e-34 seq2410 109 9e-18 seq1953 107 3e-17 seq687 107 3e-17 seq2154 104 4e-16 seq266 96.9 5e-14 seq4 93.3 7e-13 >seq1035 Length=96219 Score = 206 bits (228), Expect = 4e-47 Identities = 189/237 (80%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| | || || ||||| | | Sbjct 79353 TGTACTTGGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGCTTCGCGAGCTCGCCAGGGA 79412 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||| |||||||||| ||||||||| || || | | |||||| |||||||| |||| Sbjct 79413 GGATGAGGCGCACGGAGGTCTGGATTTCCCGCGAGGAGATCGTCGAGCGCTTGTTGTAGT 79472 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| ||| ||| | ||||||| |||| | |||||| ||||||||||| Sbjct 79473 GGGCG--AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGACGTCGTTCACAAACGAGTT 79530 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||||||| || ||||| || |||||||||||||||||||||||| Sbjct 79531 CATGATCGACATCGCCTTCGACGAGATTCCGGTGTCGGGGTGCACCTGCTTGAGCAC 79587 >seq1457 Length=5722 Score = 196 bits (216), Expect = 8e-44 Identities = 201/261 (77%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||||| |||||| |||||| | | Sbjct 2435 TGTACTTGGTGACGGCCTTGGTTCCTTCGGAGACGGCGTGCTTGGCCAACTCGCCGGGGA 2494 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||| ||||| |||| ||||||||| || |||| | ||| ||| |||||||| |||| Sbjct 2495 GGATGAGGCGGACGGAGGTCTGGATTTCCCGGGAGGAGATGGTGGAGCGCTTGTTGTAGT 2554 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || | | ||| ||| ||||||| |||| | ||||||||| |||||||| Sbjct 2555 GGGCG--AGCCTGGAGGCTTCGACAGCGATGCGCTCGAAGACGTCGTTGACGAACGAGTT 2612 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| |||||| || ||||||||| ||||||||||| || Sbjct 2613 CATGATGGACATGGCCTTGGAGGAGATTCCGGTGTCGGGGTGGACCTGCTTGAGGACGCG 2672 Query 1485708 GTAAACAAAGGACGAGTACGA 1485728 ||| || || |||||| || Sbjct 2673 GTACACGTAGACCGAGTAGGA 2693 >seq2139 Length=34178 Score = 181 bits (200), Expect = 2e-39 Identities = 198/261 (76%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||||| | || || || ||| | | Sbjct 1928 TGTACTTGGTGACGGCCTTGGTGCCTTCAGAGACGGCGTGCTTCGCGAGCTCTCCGGGAA 1987 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 ||| || || |||| ||| ||||| ||||||| | ||| ||| |||||||| |||| Sbjct 1988 GGATAAGACGGACGGAGGTTTGGATTTCGCGGGAGGAGATGGTGGAGCGCTTGTTGTAGT 2047 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| ||| || | ||||||| |||| | ||||||||| || || || Sbjct 2048 GGGCG--AGGCGAGAGGCTTCTCCGGCGATGCGCTCGAAGACGTCGTTGACGAAGGAATT 2105 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| |||||| || ||||||||| |||||||||||||| Sbjct 2106 CATGATGGACATGGCCTTGGAGGAGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACGCG 2165 Query 1485708 GTAAACAAAGGACGAGTACGA 1485728 ||| ||| | |||||| || Sbjct 2166 GTACACATACACCGAGTAGGA 2186 >seq1889 Length=309471 Score = 181 bits (200), Expect = 2e-39 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| | || || || ||| | | Sbjct 178217 TGTACTTGGTGACGGCCTTGGTTCCCTCAGAGACGGCGTGCTTTGCAAGCTCACCGGGGA 178158 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| ||||| || | ||||||||| || |||| |||||| ||||||||| | Sbjct 178157 GGATGAGGCGGACAGAGGTCTGGATTTCCCGGGACGAGATCGTCGAGCGCTTGTTGTAGT 178098 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || || ||| ||| | ||||||| |||| | ||||||||| |||||||||| Sbjct 178097 GCGCAAGACGAGAGGCTTCGCCGGCGATGCGCTCGAAGACGTCGTTGACGAACGAGTTCA 178038 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||| | ||| ||||| || ||| || || |||||||||||||| Sbjct 178037 TGATCGACATAGCCTTGGACGAGATTCCAGTGTCAGGATGGACCTGCTTGAGCAC 177983 Score = 132 bits (146), Expect = 8e-25 Identities = 187/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || ||||| ||||| ||||||| ||| | || ||||||||||| | ||||||||||| Sbjct 15162 TGATCGACGTAGCGAGCCGTGTTGTTGTACACTCGGAGCATGGGGATCAGGCCGTTGGAG 15221 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||||||| ||||| | || ||||||||||| | ||||||| | ||| Sbjct 15222 GTGCCGTTGGTTCCCGCAATCATGGTTCCCGAGGCGCGAATGCAGTGCGCGTTGAGTCCG 15281 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 ||||| ||||||| ||||||||| | ||||||| || |||| | ||||||| ||| Sbjct 15282 ATGCCTCCGGCCGACTTGGAGATCAAGGCGCACTGCCAGAGGGTCTTGAAGATGCCGTCG 15341 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGC-CGTGCC 2073779 || ||||| | | ||| | || ||||| || | || |||| || || || Sbjct 15342 ATGGAGTCATCGTGCATTGTGAGAAGGAAGCAGGAACTCATCTG-GGGCTTGCAGGTTCC 15400 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 ||| |||||||| ||||||| Sbjct 15401 GGCGTTGAAGAGGGTGGGCG 15420 Score = 98.7 bits (108), Expect = 2e-14 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623 || ||||| ||||||||| ||| ||||||||||||| || | | || ||||||||| Sbjct 14622 GGAGACGAGTACTGGACGATCTCAGTGCACAGGTTGGAGCACTTGATCGTTCCCAGGTTC 14681 Query 2071624 TGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCG 2071683 |||||||| | ||||| ||||||||||| |||||||| || | || || ||| Sbjct 14682 TGCTGGTTCGACTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAAGGAGTTCCAGTTTCG 14741 Query 2071684 ATCTGCGCCGTGACGAT 2071700 ||||| | |||||||| Sbjct 14742 ATCTGGGAGGTGACGAT 14758 >seq1633 Length=74899 Score = 167 bits (184), Expect = 4e-35 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||| ||| |||| || || ||| | | Sbjct 1801 TGTACTTGGTGACAGCCTTGGTTCCTTCGGAGACGGCATGCTTGGCGAGCTCTCCGGGAA 1742 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| ||||| || | ||||||||| || |||| ||| || ||||||||| | Sbjct 1741 GGATGAGGCGGACAGAGGTCTGGATTTCCCGGGACGAGATGGTCGAGCGCTTGTTGTAGT 1682 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || || |||||| | |||| || |||| | |||||| || |||||||||| Sbjct 1681 GCGCAAGACGCGAGGCCTCACCGGCGATTCGCTCGAAGACGTCGTTCACGAACGAGTTCA 1622 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||||||| | || |||||| || ||||||||| |||||||||||||| Sbjct 1621 TGATCGACATGGCCTTCGAGGAGATTCCAGTGTCGGGGTGGACCTGCTTGAGCAC 1567 >seq318 Length=4676 Score = 163 bits (180), Expect = 4e-34 Identities = 177/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| |||||| || ||| | | Sbjct 3728 TGTACTTGGTGACGGCCTTGGTTCCCTCAGAAACGGCGTGCTTGGCCAACTCTCCGGGGA 3787 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| ||||| || | || ||||| || |||| | ||| ||| ||||||||| | Sbjct 3788 GGATGAGGCGAACCGAAGTTTGGATTTCCCGGGAGGAGATGGTGGAGCGCTTGTTGTAGT 3847 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| ||||| || ||| | ||||||| |||| | ||||| || || || |||| Sbjct 3848 GCGCAAGGCGCGAAGCTTCGCCGGCGATGCGCTCGAAAACATCGTTCACGAAGGAATTCA 3907 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | ||| |||||| || ||| || ||||||||||||||||| Sbjct 3908 TGATGGACATAGCCTTGGAGGAGATTCCAGTGTCCGGATGCACCTGCTTGAGCAC 3962 >seq2410 Length=40269 Score = 109 bits (120), Expect = 9e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| |||| || || || | | Sbjct 7748 TGTACTTGGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGCTTGGCGAGCTCACCAGGGA 7807 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT 1485584 ||| ||||| |||| |||||||| || |||| | ||| ||| ||||||||| Sbjct 7808 GGATGAGGCGGACGGAAGTCTGGATTTCCCGGGAGGAGATGGTGGAGCGCTTGTT 7862 >seq1953 Length=45998 Score = 107 bits (118), Expect = 3e-17 Identities = 140/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 118709 GGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCG--GTCCGAGAGCATGTCGACG 118766 ||||||||| ||||||| |||||| ||||| | || |||||| ||| ||||| Sbjct 3867 GGCGATCTGCTTCGTGAGCCGCTCCTGGACCTGAAGACGACGTCCGAA--CATCTCGACA 3924 Query 118767 ATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCC 118826 || |||| || |||||| || || | ||| | |||||| || || | |||| || Sbjct 3925 ATACGCGCGAGCTTGCTGAGCCCAAGAATCTTCTTGTTGGGCAGATATCCGATGTGCACC 3984 Query 118827 TTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACG 118886 ||||| || ||||| | || ||||||||||| | |||||| || || ||||| || ||| Sbjct 3985 TTGCCAATGAAGGGGACAAGGTGGTGCTCGCAGAGGGAGAAGAACTCGATGTCCCGGACG 4044 Query 118887 GTCACCATCTCG 118898 ||||||||| Sbjct 4045 AGGACCATCTCG 4056 >seq687 Length=17398 Score = 107 bits (118), Expect = 3e-17 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 429527 CGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCA 429586 ||| ||||| || ||||| ||||||| | | ||| | |||||||||||| | ||||| Sbjct 15324 CGTGGAGCGTCATATGCGCGACGGCGACGTCATTGTCTTCAACCGGCAGCCGACTCTCCA 15383 Query 429587 CATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCC-GGTCGCACCTTCCGGCTCA 429645 || | ||| ||| | ||||| ||| | | ||| |||| || |||||| | | Sbjct 15384 CAAGATGTCCATGATGGGCCACAGGGTCAAGATTCTTCCCTGGTCA-ACGTTCCGGATGA 15442 Query 429646 ACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACG 429705 |||| | || ||| |||||||||| || || ||||||||||||||||||||||| Sbjct 15443 ACCTCTCGGTAACGACGCCCTACAACGCAGATTTCGACGGCGACGAGATGAACCTGCATC 15502 Query 429706 TGCCCCAGTCGGAGATGGCACGCGCCGA 429733 | || |||||| | | | |||||||| Sbjct 15503 TCCCGCAGTCGCTGGAGACTCGCGCCGA 15530 >seq2154 Length=523210 Score = 104 bits (114), Expect = 4e-16 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||||| |||||| || || |||||||||| |||||| ||||||| | | Sbjct 156260 TGTACTTCGTGACGGACTTGGTTCCTTCGCTGACGGCGTGCTTGGCCAATTCGCCGGGGA 156319 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| || || ||||||| || ||| | |||| | | Sbjct 156320 AGATGAGACGAACAGCGGTTTGAATTTCGCGGGAAGAGAGGGTGCTCTTCTTGCTGACGT 156379 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGA-GTTC 1485648 | ||| || ||||| || ||||||| |||| ||||| || || | | ||| Sbjct 156380 TGGTCAGCCGCGAAGCCTCCGTAGCGATGCGCTCGAAGATGTCCGTG-CACATGCTGTTG 156438 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGC 1485702 | || ||||||| ||| ||||||||||| || || || |||||||| ||| Sbjct 156439 AGGACGGACATCGCCTTGCTGGAGATGCCCTTCTCCGGATGGACCTGCTTCAGC 156492 >seq266 Length=548126 Score = 96.9 bits (106), Expect = 5e-14 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 2035571 GCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCCACCCT 2035630 |||||| ||| |||| || | ||||| ||| || | |||||||| ||||| Sbjct 123627 GCGCACGGACAACATCCCGGCATGGGATAAGAAGTTCCTGAACGTCGACCAGGGAACCCT 123568 Query 2035631 CTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTG 2035690 || ||| | ||||| || ||||||||||| || |||| | || || || | ||| Sbjct 123567 GTTCGAGATCATCCTTGCTGCCAACTACCTGGAAATCAGCGCGCTTCTGGACAACGCGTG 123508 Query 2035691 CAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCG 2035738 ||||||||||| ||| | |||||||||||| |||||||| | ||||| Sbjct 123507 TAAGACCGTGGCAAACATGATCAAGGGCAAGACGCCCGAGCAGATCCG 123460 >seq4 Length=195412 Score = 93.3 bits (102), Expect = 7e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| ||||| |||| ||||||||| ||| || ||||||||||| |||||| Sbjct 71357 CCTTCATCGCGGGAAATCAGTTCGTTGCTGTGAGTGAGTCCAGGCATGAGGCCTCGCTTC 71298 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 |||||||||||||||||| ||| || ||||| ||||| || || |||||||| || Sbjct 71297 TTGAGCCAAAAGATGGCAGCGAACGACCCAGAGAAGAAGATTCCTTCAACGGCGGCGAA 71239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915941743257296