Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq2638 196 1e-45 >seq2638 Length=7155 Score = 196 bits (216), Expect = 1e-45 Identities = 281/393 (72%), Gaps = 6/393 (2%) Strand=Plus/Plus Query 5170 GGTGACCGCAGACGCCATTATCAAACTGATTTACACGCTGCGTAAGGCACACCGCACAGG 5229 ||| || ||||||| ||| | |||||||| ||||| ||||| ||| || |||||| || Sbjct 220 GGTCACGGCAGACGACATCCTGAAACTGATCTACACCCTGCGCAAGCCATACCGCAACGG 279 Query 5230 CGCGAAGTTCATGATGAACAACAATAGCCTGTT-TGCCA--TCCGTCTGCTGAAAGACAG 5286 ||||| ||||||||||||||||| |||||| | || | || |||||||||||| Sbjct 280 GGCGAAATTCATGATGAACAACAA---CCTGTTATTTCAGGTACGCACGCTGAAAGACAG 336 Query 5287 CGAGGGTAACTATCTGTGGCGTCCGGGGCTGGAGCTGGGGCAGCCGTCCTCTCTGGCGGG 5346 |||| || || ||||||| ||||| || | ||||| ||||| || | ||| ||| Sbjct 337 TCAGGGCAATTACCTGTGGCAGCCGGGTTTGCAACTGGGACAGCCCTCTGCGCTGCTGGG 396 Query 5347 TTACGGTATCGCTGAAAACGAACAGATGCCGGATATCGCCGCTGATGCGAAAGCCATTGC 5406 ||||||||||| |||||||||||| | ||||| | | || | ||| | | | Sbjct 397 CTACGGTATCGCGGAAAACGAACAGTTTGCGGATTTGGGCGTCGGTGCCGTGCCGGTGGT 456 Query 5407 ATTTGGTAACTTCAAACGGGGTTACACCATCGTTGACCGTATCGGCACCCGCATTCTGCG 5466 || |||||||| ||||| | |||||||| | ||| | | || || || ||||| Sbjct 457 GTTCGGTAACTTTAAACGTTGCTACACCATTTTGGACAGGCTGGGTGTACGTATGCTGCG 516 Query 5467 TGACCCGTACACCAATAAACCGTTTGTCGGTTTTTATACCACCAAACGCACCGGCGGCAT 5526 ||| ||||||||| | || |||||| || || || |||||||| || || | | Sbjct 517 TGATCCGTACACCCACAAGCCGTTTATCCACTTCTACACCACCAAGCGGGTGGGTTCCCT 576 Query 5527 GCTGGTCGATTCGCAGGCCATCAAACTGCTGAA 5559 |||||| || | || || ||||||||||| Sbjct 577 GCTGGTGGACAGCAACGCGATGAAACTGCTGAA 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127099677192960