Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq2599 95.1 3e-15 seq1458 84.2 6e-12 seq2442 80.6 7e-11 >seq2599 Length=15424 Score = 95.1 bits (104), Expect = 3e-15 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 23536 CTTCCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGG 23595 || || || | |||||| || ||||||| || || | || ||||| | || || ||| Sbjct 132 CTGCCTTTCCTCAGATATTCACCGGCAACTTCTGCCAGTTTTCCGAACAGAACCACACGG 191 Query 23596 TGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTG 23655 |||||||| || |||||| | |||| || | |||||||| ||||| | ||| || || Sbjct 192 TGCCATTCTGTTTTTTCCCTCAGCTCACCTGATTGCTTGTCTTTCCATGCTTCAGAGGTA 251 Query 23656 GCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTA 23715 ||||| |||| ||| ||| || | || || | ||| || ||||||||||| | | Sbjct 252 GCCAGTGTGATATTGGTGACTGCGCCACCATTGGGTGAGTAACGTACTTCCGGGTCTTGA 311 Query 23716 CC 23717 || Sbjct 312 CC 313 >seq1458 Length=11418 Score = 84.2 bits (92), Expect = 6e-12 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || || ||||| ||||| || || | || || | || ||||| | || || |||||| Sbjct 11078 CCTTTACGCAGGTACTCACCAGCGACTTCTGCCAGTTTACCGAACATGACCACTCGGTGC 11019 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 |||||||| || || | ||| ||||| ||||| || |||| | || ||||||||| Sbjct 11018 CATTCGGTTTTCTCTCTCATCTCACCGGTTTGCTTATCACGCCAGCTCTCGGACGTGGCC 10959 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 || | |||||| || || | || || ||| ||||| |||||||| || | ||| Sbjct 10958 AGAGTAATGTTGGCAACTGCTCCACCATTCGGCATATAGCGAACTTCCGGATCCTGCCCC 10899 Query 23719 A 23719 | Sbjct 10898 A 10898 >seq2442 Length=9075 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 21070 CCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCTGAG 21129 ||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 9075 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 9016 Query 21130 CTACGGG 21136 ||| ||| Sbjct 9015 CTAAGGG 9009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139278462978368