Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq2691 98.7 1e-15 >seq2691 Length=1164 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 87441 CGGTAAATCACACTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACG 87500 ||||||||||||||| | || || || ||||| || || ||||| ||||||| || Sbjct 933 CGGTAAATCACACTGGCTGATATCCCCATTCACAATTACTGTTACGTTTTCACCCAATCG 992 Query 87501 TGTCAGGAACATTTTCATCTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTAC 87560 || | ||||||||||| || | || || ||||| ||||| || ||||| || | Sbjct 993 GGTTAAAAACATTTTCATTTGGTTAATTGTCACATTCTGAGCTTCATCAAGGATCACAAA 1052 Query 87561 CGCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTCCACCTT 87614 || || ||||| || | |||||||||||| || || || || || || || || Sbjct 1053 TGCATTTTCAAATGTCCTGCCACGCATATAAGCAAAAGGTGCTATCTCGACTTT 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698531791666560