Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq1458 183 8e-42 seq2629 141 2e-29 >seq1458 Length=11418 Score = 183 bits (202), Expect = 8e-42 Identities = 221/299 (74%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 38193 AATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGA 38252 |||||| |||||||| |||||||| || || ||| | ||| | | || || ||||| || Sbjct 10854 AATGGCCAGCAGAGGCGTAAACAAAGTTATTTTAGTGGGTAATTTGGGGCAGGATCCGGA 10913 Query 38253 GGTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGT 38312 || |||||| | || | || || ||||| || ||||| || | || ||||| ||| Sbjct 10914 AGTTCGCTATATGCCGAATGGTGGAGCAGTTGCCAACATTACTCTGGCCACGTCCGAGAG 10973 Query 38313 TTGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTT 38372 ||||| |||||||||||||| || | ||||||||| || ||||||||||| | Sbjct 10974 CTGGCGTGATAAGCAAACCGGTGAGATGAGAGAGAAAACCGAATGGCACCGAGTGGTCAT 11033 Query 38373 GTTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATAT 38432 ||| || || ||||| ||||| ||||| || ||||| || ||||| ||||| || ||||| Sbjct 11034 GTTCGGTAAACTGGCAGAAGTCGCTGGTGAGTACCTGCGTAAAGGCTCTCAGGTCTATAT 11093 Query 38433 TGAAGGCCAGCTT--GAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACAC 38489 ||||| |||| | || || |||| |||||| || |||||||| || ||||| Sbjct 11094 CGAAGG--TGCTTTGCAGACCCGTAAATGGCAGGATCAGAGTGGTCAGGATCGTTACAC 11150 >seq2629 Length=15125 Score = 141 bits (156), Expect = 2e-29 Identities = 213/301 (71%), Gaps = 4/301 (1%) Strand=Plus/Plus Query 38193 AATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGA 38252 |||||| || | ||| ||||||||||| ||| | || |||||| | || ||||| || || Sbjct 12250 AATGGCTAGTAAAGGCGTAAACAAGGTAATCCTCATAGGTCACTTAGGCCAAGACCCTGA 12309 Query 38253 GGTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGT 38312 | || || | ||| || || ||||| ||||| ||||| |||| || || || Sbjct 12310 AATTCGATACATGCCAGCAGGGGGAGCAGTAGCAAATCTCACACTAGCCACATCGGAATC 12369 Query 38313 TTGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGT--TACT 38370 ||||| || || ||| | || | |||||||| || ||||| ||||| || | Sbjct 12370 GTGGCGTGACAAACAATCGGGTGAAATGCGCGAGAAAACCGAATGGCATCGAGTGGTAAT 12429 Query 38371 TTGTTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTAT 38430 || | || ||| | ||||||||||| |||||||| || ||||||| || || || Sbjct 12430 TT--TCGGCAAGTTAGCTGAAGTTGCAGGCGAATATCTGAAAAAAGGAAGCCAGGTATAC 12487 Query 38431 ATTGAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACACA 38490 || |||||| || |||| || |||| || ||||||||||| |||||||||||| Sbjct 12488 ATCGAAGGCTCTCTGCAAACGCGTAAATGGCAAGACCAAAGCGGTCAAGACCGATACACA 12547 Query 38491 A 38491 | Sbjct 12548 A 12548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132894680098208