Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq2606 208 2e-49 >seq2606 Length=3143 Score = 208 bits (230), Expect = 2e-49 Identities = 375/546 (69%), Gaps = 14/546 (3%) Strand=Plus/Plus Query 24958 GGCTTGCGCGCCAAGATCGACAACGACACCGGCTGGCACAAGACGCTTTCCAACGTGGCT 25017 |||||||| ||||| |||||| | || |||||||||||||| || || ||||| |||| | Sbjct 824 GGCTTGCGTGCCAAAATCGACGAAGAAACCGGCTGGCACAAAACCCTATCCAATGTGGGT 883 Query 25018 GTGGGTGGCGTGACTGGCCTGTCGCGCGACGTTTTCTGGGACCTCCAGGACCCGGCGACC 25077 || ||||| || || || || || || |||||||| || || | | | || Sbjct 884 GTTAACGGCGTAACGGGTCTATCTGCTGATGTCTTCTGGGATCTGCAAGCGACTGGAACT 943 Query 25078 GACGCGGGCTACCTGAACGCCAACGAGGTGACCACGCTGGTTCACCGCGACGGCTACCGC 25137 || || | |||||| || | | || || ||| | | | |||| | || Sbjct 944 GAGGCTGATCTGCTGAACCAGAATCACATCACAACACTGATCCGCAAAAACGGTTTTCGT 1003 Query 25138 TTCTGGGGCTCGCGCACGTGCA--------GC----GCGGATCCGCTGTTCGCCTTCGAG 25185 |||||||| || ||||| ||| || | ||| | |||||| | ||||| Sbjct 1004 TTCTGGGGTTCACGCACTTGCGCTGGCTCTGCTTCTGAGGACTCACTGTTCCCATTCGAA 1063 Query 25186 AACTACACCCGCACCGCCCAGGTGCTGGCCGACACCATGGCGGAAGCCCACATGTGGGCA 25245 | ||||||||| ||||| ||||| ||||| ||||||||||| || || || ||||||||| Sbjct 1064 AGCTACACCCGTACCGCTCAGGTACTGGCTGACACCATGGCTGACGCGCATATGTGGGCA 1123 Query 25246 AACGATCTGCCGATGACGCCGACGCTGGTCCGCGATCTGCTGGAGGGCATCAACGCCAAG 25305 | ||| ||| |||| || ||||||| ||||| | | || |||||||| || ||| Sbjct 1124 ATCGACAAACCGCTGACCCCATCGCTGGTACGCGACATTATCGAAGGCATCAATGCTAAG 1183 Query 25306 CTGCGCATGCTGACCCGCAACGGCTACCTGCTGGGCGG-CGCCGCGTGGTTCGACCCGGA 25364 | || |||| ||||||| | | | ||| || || |||| ||| | Sbjct 1184 TTCCGTGAACTGAAAGCGGGCGGCTACATCATTGACGGTCGTTGC-TGGTATGACGACAA 1242 Query 25365 AGCCAACACCAAGGACACGCTGAAGGCCGGCCAGCTCGCCATCGACTACGACTACACGCC 25424 | |||| || ||||| ||||| || ||| | || ||||||| |||||||| || || Sbjct 1243 AATCAACGATAAAGACACCCTGAAAGCAGGCAAACTGACCATCGATTACGACTATACCCC 1302 Query 25425 CGTCCCGCCGCTGGAAGACCTCACGTTCCGCCAGCGCATCACCGACCGCTACCTGATGCA 25484 || ||||| |||||| || | | ||| ||||||||||| || || | ||||||||| | Sbjct 1303 TGTACCGCCACTGGAAAACATGATGTTACGCCAGCGCATTACAGATAGTTACCTGATGGA 1362 Query 25485 GTTCGC 25490 ||||| Sbjct 1363 TTTCGC 1368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127880450637952