Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2162 91.5 1e-13 >seq2162 Length=74254 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || ||||| || ||| | ||||| | || |||| ||| Sbjct 48845 TGGAGAGTGGACTCCTTCTGGATGTTATAGTCGCTCAAGGTGCGGCCATCCTCCAGTTGC 48786 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||| || |||||| | || | ||||||||||| ||| || Sbjct 48785 TTTCCGGCGAAGATAAGACGTTGTTGATCTGGGGGAATTCCTTCTTTGTCTTGAATCTTA 48726 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| || | || | || ||| | ||| || || | ||||| || || ||||| Sbjct 48725 GCTTTC-ACGTTCTCGATGGAGTCAGATCCTTCAACCTCGAGAGTGATGGTCTTTCCTGT 48667 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 |||||||| || ||||||||||| Sbjct 48666 CAACGTTTTCACGAAGATCTGCAT 48643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328692526586880