Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq1458 150 5e-32 seq2599 122 2e-23 seq2629 93.3 1e-14 >seq1458 Length=11418 Score = 150 bits (166), Expect = 5e-32 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 || |||| |||||| ||||| ||||| ||| ||| |||||||| || || || ||| Sbjct 11165 ACAACGACTTCAGTCGTGTAACGATCCTGACCACTCTGATCCTGCCATTTACGGGTCTGC 11106 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 | || ||||| || | |||| |||||| |||||||||| | |||| ||||||| Sbjct 11105 AAAGCACCTTCGATATAGACCTGAGAGCCTTTACGCAGGTACTCACCAGCGACTTCTGCC 11046 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 || || ||||| |||||||| ||||||||||| ||||| ||| || |||| || || ||| Sbjct 11045 AGTTTACCGAACATGACCACTCGGTGCCATTCGGTTTTCTCTCTCATCTCACCGGTTTGC 10986 Query 410 TTATCCTTCCAGGTTTCAGACGTGGC 435 ||||| |||| | || |||||||| Sbjct 10985 TTATCACGCCAGCTCTCGGACGTGGC 10960 >seq2599 Length=15424 Score = 122 bits (134), Expect = 2e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 266 TGGTCCTGCCACTTGCGCGTTTGCAGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGC 325 ||||| ||||||||||| ||||||| || ||||| | | || ||||||||| | | Sbjct 84 TGGTCTTGCCACTTGCGTGTTTGCAATTGACCCTCAATATAAATCTGGCTGCCTTTCCTC 143 Query 326 AGGTACTGGCTGGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTT 385 || || | | ||| | ||||||||| |||||||| | ||||| ||||||||||| ||| Sbjct 144 AGATATTCACCGGCAACTTCTGCCAGTTTTCCGAACAGAACCACACGGTGCCATTCTGTT 203 Query 386 TTTTCTTTCTTCTCCCCTGTCTGCTTATCCTTCCAGGTTTCAGACGTGGC 435 ||||| || ||| |||| ||||| || ||||| | |||||| || || Sbjct 204 TTTTCCCTCAGCTCACCTGATTGCTTGTCTTTCCATGCTTCAGAGGTAGC 253 >seq2629 Length=15125 Score = 93.3 bits (102), Expect = 1e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 || || | ||| |||||||| || || || ||||| ||||| || ||||||||| Sbjct 12561 ACTACCACTTCCGTTGTGTATCGGTCTTGACCGCTTTGGTCTTGCCATTTACGCGTTTGC 12502 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 || | |||||| ||| | |||| ||| ||||| ||| || | || || | ||| || Sbjct 12501 AGAGAGCCTTCGATGTATACCTGGCTTCCTTTTTTCAGATATTCGCCTGCAACTTCAGCT 12442 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTC 390 | ||| ||||| || ||||| || |||||||| ||||| || Sbjct 12441 AACTTGCCGAAAATTACCACTCGATGCCATTCGGTTTTCTC 12401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135396994991584