Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq2692 127 8e-25 seq2565 84.2 9e-12 >seq2692 Length=686 Score = 127 bits (140), Expect = 8e-25 Identities = 259/381 (68%), Gaps = 8/381 (2%) Strand=Plus/Minus Query 25546 ATCCTGGATCAGTTTCTGGATGAAAAAGAAGGTAACCACACCACGGCATACCGTGATGGT 25605 || || | ||||||| ||||||||||||| || |||| |||| || || |||| Sbjct 637 ATTCTCGCTCAGTTTTTGGATGAAAAAGAGGGCAACCGATTATCGGCGTATCGGGATGCA 578 Query 25606 GCGGGGATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCT 25665 || || |||||||| |||||||| || | ||||| | |||||| || || || Sbjct 577 GCTGGCATCTGGACAATCTGCCGGGGCGTAACCCGAATTGATGGTGCTCCCGTTCGTCAG 518 Query 25666 GGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTT---AACGCTATCGAACGGGATAAG 25722 || ||| | ||| | | | ||||| || | | ||||| | ||| ||| || Sbjct 517 GGTATGCAACTGACACCGAACCAATGC---CGTGATCTCAACGCCAAAGAAGCAGATCAG 461 Query 25723 GCGCTGGCATGGGTGGAGAAAA-ACATCAAAGTGCCACTGACTGAACCCCAGAAAGCGGG 25781 || | |||||||| |||| | || || ||||||||||||||||| |||| ||| || Sbjct 460 GCCGTTGCATGGGTC-AGAAGCCATATTAACGTGCCACTGACTGAACCACAGATAGCCGG 402 Query 25782 TATTGCGTCATTCTGTCCTTACAACATTGGCCCGGGTAAGTGTTTCCCGTCGACGTTTTA 25841 ||||| ||||| || |||||||| ||||| |||| || ||| | || ||||| || Sbjct 401 CATTGCCAGTTTCTGCCCATACAACATCGGCCCCGGTAGATGCTTCTCTTCCACGTTCTA 342 Query 25842 TAAACGAATTAATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGATTAA 25901 | | | ||||| || ||| | |||| || || | | ||| | ||||| Sbjct 341 CCGAAAACTGAATGCGGGTGATAGGCAAGGGGCTTGTCAGGAAATTAAACGCTGGATATT 282 Query 25902 GGACGGTGGCAGGGACTGCCG 25922 ||||| ||||| || ||||| Sbjct 281 TGACGGCGGCAGAGATTGCCG 261 >seq2565 Length=10326 Score = 84.2 bits (92), Expect = 9e-12 Identities = 169/247 (68%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 25545 AATCCTGGATCAGTTTCTGGATGAAAAAGAAGGTAACCACACCACGGCATACCGTGATGG 25604 ||| || | |||||| || || || |||||||| |||| |||| || || || | Sbjct 10074 AATACTCGCTCAGTTCCTCGACGAGAAAGAAGGCAACCGGTTATCGGCGTATCGGGACGC 10133 Query 25605 TGCGGGGATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCC 25664 | || |||||||| |||||| | || | ||||| | |||||| || || | | Sbjct 10134 AGGCGGCATCTGGACAATCTGCAGGGGCGTGACCCGAATTGATGGTGCTCCGGTCAGGCA 10193 Query 25665 TGGCATGAAGCTGTCGAAGGAAAAATGC---GACCGGGTTAACGCTATCGAACGGGATAA 25721 || ||| | ||| | | | ||||| |||| ||||||| | ||| ||| | Sbjct 10194 GGGTATGCAACTGACACCGAACCAATGCCGTGACC---TTAACGCGAAAGAAGCGGAGCA 10250 Query 25722 GGCGCTGGCATGGGTGGAGAAAA-ACATCAAAGTGCCACTGACTGAACCCCAGAAAGCGG 25780 ||| | |||||||| |||| | ||||| ||||||||||||||||| |||| ||| | Sbjct 10251 GGCCATTGCATGGGTC-AGAAGCCATATCAACGTGCCACTGACTGAACCGCAGATAGCAG 10309 Query 25781 GTATTGC 25787 | ||||| Sbjct 10310 GCATTGC 10316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200505001128640