Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2252 102 7e-17 >seq2252 Length=1130325 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 25173 ACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCA 25232 |||||||| | || || || || | || ||||| | ||||| |||| ||||||||| Sbjct 563968 ACATGCAAATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTCGAAGCCT 563909 Query 25233 ACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 || |||||||| | || || || || || || ||||| || || ||||||| Sbjct 563908 CTGACACTATCGAAAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCCGATC 563849 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACA 25352 |||| | || || | || ||| || || ||||| |||| | | | ||||||| |||| Sbjct 563848 AGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCAGCGACTACA 563789 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGT 25383 | || || || ||||| ||| ||||| |||| Sbjct 563788 ACATCCAGAAGGAATCGACCCTTCATCTAGT 563758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445078465620480