Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq2766 104 7e-18 >seq2766 Length=35022 Score = 104 bits (114), Expect = 7e-18 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 3441 ATCAACCTCTATATCAATTCACCTGGAGGGTCTGTTTTCGAAGGAATTGCTATACACAAT 3500 |||||||| |||| ||||||| ||||| ||||| || || || ||||| ||||| Sbjct 17921 ATCAACCTTCATATTCATTCACCAGGAGGTGAGGTTTTTGAGGGGATCGCTATTTACAAT 17862 Query 3501 ATGCTGAAACGGCACAAGGCGAACGTACATGTTCATGTGGATGCTTTAGCCGCATCGATT 3560 ||| ||| ||||| || ||| | ||| || | |||| ||||| || ||||| Sbjct 17861 CAGCTCAAAAATCACAATGCCAACATTACGGTTTATATCGATGGGTTAGCAGCTTCGATG 17802 Query 3561 GCCAGTGTCATTGCCATGGCAGGTGACACGATTTATATGCCTAAAAATAGCATGCTGATG 3620 || ||||||||||||| |||||| | | ||||| |||||| |||| ||||| Sbjct 17801 GCGTCAGTCATTGCCATGGTAGGTGATGAAGTCAAAATGCCAAAAAATGCCATGATGATG 17742 Query 3621 ATTCATAATCCTTGG 3635 || ||||| |||||| Sbjct 17741 ATCCATAAACCTTGG 17727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141470388428448