Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_028758.1 Length=35644 Score E Sequences producing significant alignments: (Bits) Value seq2766 86.0 1e-12 >seq2766 Length=35022 Score = 86.0 bits (94), Expect = 1e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 3483 GTTTTTGAGGGAATTGCCATTCATAATATGCTGAAACGGCATAAAGCAAAAGTAAATGTT 3542 ||||||||||| || || ||| | ||| ||| ||| || || || || | | ||| Sbjct 17888 GTTTTTGAGGGGATCGCTATTTACAATCAGCTCAAAAATCACAATGCCAACATTACGGTT 17829 Query 3543 TATGTAGATGCGTTAGCGGCATCGATTGCAAGTGTCATTGCCATGGCAGGTGACACGATT 3602 ||| | |||| |||||| || ||||| || ||||||||||||| |||||| | Sbjct 17828 TATATCGATGGGTTAGCAGCTTCGATGGCGTCAGTCATTGCCATGGTAGGTGATGAAGTC 17769 Query 3603 TATATGCCTAAAAATAGCATGCTGATGATTCATCATCCCTGG 3644 | ||||| |||||| |||| ||||||| ||| | || ||| Sbjct 17768 AAAATGCCAAAAAATGCCATGATGATGATCCATAAACCTTGG 17727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113935324927808