Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_028788.1 Length=37246 Score E Sequences producing significant alignments: (Bits) Value seq2766 80.6 6e-11 >seq2766 Length=35022 Score = 80.6 bits (88), Expect = 6e-11 Identities = 115/162 (71%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 3474 GTTTTTGAGGGAATTGCCATTCATAATATGCTGAAACGGCATAAAGCAAAAGTAAATGTT 3533 ||||||||||| || || ||| | ||| ||| ||| || || || || | | ||| Sbjct 17888 GTTTTTGAGGGGATCGCTATTTACAATCAGCTCAAAAATCACAATGCCAACATTACGGTT 17829 Query 3534 TATGTAGATGCGTTAGCGGCATCGATTGCAAGTGTCATTGCCATGGCAGGTGACACGATT 3593 ||| | |||| |||||| || ||||| || ||||||||||||| |||||| | Sbjct 17828 TATATCGATGGGTTAGCAGCTTCGATGGCGTCAGTCATTGCCATGGTAGGTGATGAAGTC 17769 Query 3594 TATATGCCTAAAAATAGCATGCTCATGATTCACAACCCATGG 3635 | ||||| |||||| |||| | ||||| || || || ||| Sbjct 17768 AAAATGCCAAAAAATGCCATGATGATGATCCATAAACCTTGG 17727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119061550578944