Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_028855.1 Length=44846 Score E Sequences producing significant alignments: (Bits) Value seq2774 86.0 2e-12 >seq2774 Length=20939 Score = 86.0 bits (94), Expect = 2e-12 Identities = 175/256 (68%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 20606 AAAATTATAAGCTGGCTTGAGCATTTGCCCAACAGGACGCATAATTAATGTAAGCAATCG 20665 ||| ||||| |||||||| || || | | || || ||||| |||| || || |||| Sbjct 14297 AAAGTTATACGCTGGCTTCAGAATATCGCTCACGGGGCGCATGATTAGGGTTAGTAATC- 14355 Query 20666 GCTATGA---TGTACATTTTTACCCATAACCCACCACTGCTTAGGAACAAAGAAATCGCT 20722 ||| | || ||| ||||| | ||| ||||||| |||| || |||||||| Sbjct 14356 --TATCAGCGTGAGTATTCTTACCTAAAACAAACCACTGAGTAGGCACGAAGAAATCAGG 14413 Query 20723 TTCTAGT-GGATTATTTGCATTGTACATACTAGGTGTAGACCAAACAGGCTCAATAACTG 20781 || || || | ||| ||||||||||||||||| ||||| | ||||||||| || | Sbjct 14414 G-CTGGTCGGGTCGGTTGAGTTGTACATACTAGGTGTTGACCAGATAGGCTCAATCACCG 14472 Query 20782 TAAAGCCTTTTAATGAGCCTTTCTTAATGCCTTTATCATTGATCAATAGCGGTAAGTCGG 20841 ||| || |||| |||| ||| | || ||||| || | ||| ||||| || Sbjct 14473 CAAATCCGTTTAGCTCACCTTCCTTTACTCCCGCCTCATTAATAAGTAGTGGTAAATCAC 14532 Query 20842 TTTTATCCTCTTGACC 20857 ||||| || || || Sbjct 14533 GCTTATCATCATGCCC 14548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143380723455744