Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq2668 134 3e-27 >seq2668 Length=6945 Score = 134 bits (148), Expect = 3e-27 Identities = 247/357 (69%), Gaps = 10/357 (3%) Strand=Plus/Plus Query 24392 TTAAGTGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTC 24451 ||| ||||| || |||| ||||| ||||| || |||| |||| ||| ||| Sbjct 558 TTAGGTGTATTAGCCCAAATTTAATCCGACAGCTACCTATTTT---TTACTGTGA--GTC 612 Query 24452 AGATTAATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGC 24511 | |||||||||| ||||||||||| |||||| ||||||||||||| |||| || | Sbjct 613 ---TAAATTTGAGCT-AAATTCTTTTCTGCCCAAACCCGTTTTCCATCATGTAATGTGAC 668 Query 24512 CATCGGTGTTCTGCCACAGCACATTTTTCC-TTGATGTGTTCGATGGTGATTATAATACA 24570 |||||||||||| |||| || ||||||||| ||||| | ||| | || |||||||| | Sbjct 669 CATCGGTGTTCTCCCACCGCTCATTTTTCCACTGATGGGGTCGTTCATGGTTATAATAGA 728 Query 24571 TTAACCACTCATCTAAATCCGCTTGTAATGTCGTTAAATCCGTATAAATTTTCTTCCTAA 24630 | ||||| || |||| ||| | | || | || | ||||| | | Sbjct 729 TCAACCAGCAGTCCAAATTTTTTTGCAGCTGCTCCGGATTGCTGTACAGCTTCTTACGGA 788 Query 24631 ATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATGCCGTTAG 24690 || ||| || ||||| || | || || ||||||||||| || || || || || || | Sbjct 789 GTGTCACCTGATAAAACTCATTCAAAATCGTTTTATGGAAGCGCTCACAAATCCCATTCG 848 Query 24691 TCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTTATTGCTAAATAAA 24747 | || || ||| | || |||||| | || | || ||||| || || | ||||| Sbjct 849 TTTGTGGGTGTCAGGCTTTCGTTTTAGTATGGTAGATGTCATTAATCGCCAGATAAA 905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114319311867968