Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_028995.1 Length=43216 Score E Sequences producing significant alignments: (Bits) Value seq2774 80.6 7e-11 >seq2774 Length=20939 Score = 80.6 bits (88), Expect = 7e-11 Identities = 183/273 (67%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 12498 GATTTACCATTGTTAATTAATGAAAAGGGTATTCAAAAGGGTTCATTAGAAGGATTCACA 12557 ||||||||| | | |||||||| ||| | | | ||| || | ||||| | Sbjct 14530 GATTTACCACTACTTATTAATGAGGCGGGAGTAAAGGAAGGTGAGCTAAACGGATTTGCG 14471 Query 12558 GTCATCGAGCCAATGTGGACAGCACCGAGTATGTACAATGCAAGTGATGCAACCAAACCT 12617 || || ||||| || ||| || |||| ||||||||||| ||| || | |||| ||| Sbjct 14470 GTGATTGAGCCTATCTGGTCAACACCTAGTATGTACAACTCAACCGACCCGACCAGCCCT 14411 Query 12618 GATTTCTTTGTGCCTTCTGTGTGGTGGGCGATGGGTAAGGAGATTCATCACAG-CCGTTT 12676 |||||||| |||||| || ||||| | | |||||| | | ||| | | | | || Sbjct 14410 GATTTCTTCGTGCCTACTCAGTGGTTTGTTTTAGGTAAGAATACTCA-CGCTGATAGATT 14352 Query 12677 AATGACGCTTATTACTCGACCCTTGCCTGATATGCTCAAGCCTGCATACAACTTCTACGG 12736 | | || || || | || ||| || ||||| || ||||| || || ||||| ||| Sbjct 14351 ACTAACCCTAATCATGCGCCCCGTGAGCGATATTCTGAAGCCAGCGTATAACTTTAGCGG 14292 Query 12737 TATTGCAATGTCGCAGTTGATGTTGCCGTATGT 12769 | | ||| ||||| ||| ||||||||| Sbjct 14291 ATTATCCATGCTTCAGTTAATGAAGCCGTATGT 14259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138164900851904