Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=195412 Score = 89.7 bits (98), Expect = 4e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || ||||| ||||| || ||||| ||||| |||||||||||||| | ||||||||||||| Sbjct 71712 TGATATTCAGATACCCGTTTTTCAAAGAAGTTAGTTTTGCCTTCGATCGAAATATTTTCC 71653 Query 4320 ATAAAATCAAACGGATT 4336 ||||| || || ||||| Sbjct 71652 ATAAAGTCGAAAGGATT 71636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| |||| || | ||||| || | | |||||||||||| || | | Sbjct 71378 CAGGCAAAGTCACGGTGAAGGCCTTCATCGCGGGAAATCAGTTCGTTGCTGTGAGTGAGT 71319 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | |||| ||| || |||||||| || || || || |||||||| ||||| Sbjct 71318 CCAGGCATGAGGCCTCGCTTCTTGAGCCAAAAGATGGCAGCGAACGACCCAGAGAAGAAG 71259 Query 4668 ATGCCTTCTACGGCGGCAAACGC 4690 || ||||| |||||||| ||||| Sbjct 71258 ATTCCTTCAACGGCGGCGAACGC 71236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427034693833712