Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq2442 123 3e-23 seq2826 93.3 4e-14 seq2664 89.7 5e-13 >seq2442 Length=9075 Score = 123 bits (136), Expect = 3e-23 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 66410 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 66469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9075 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 9016 Query 66470 CTAAGAGTGCATT 66482 ||||| | ||||| Sbjct 9015 CTAAGGGCGCATT 9003 >seq2826 Length=8177 Score = 93.3 bits (102), Expect = 4e-14 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGC 66455 |||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56 AAATGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGC 1 >seq2664 Length=5510 Score = 89.7 bits (98), Expect = 5e-13 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 66402 ATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGC 66455 |||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5457 ATGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGC 5510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522096508275840